DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment awd and Nme4

DIOPT Version :10

Sequence 1:NP_476761.3 Gene:awd / 43739 FlyBaseID:FBgn0000150 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001102948.1 Gene:Nme4 / 685679 RGDID:1591334 Length:185 Species:Rattus norvegicus


Alignment Length:139 Identity:77/139 - (55%)
Similarity:103/139 - (74%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYM 84
            :|||.:.||||||||.|||.:|.|||::|||||.:|...|.:.:|.:||.||..:||:|.|::||
  Rat    35 QERTLVAVKPDGVQRRLVGTVIHRFERRGFKLVGMKMLQAPESILAEHYRDLQRKPFYPALISYM 99

  Fly    85 NSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALW 149
            :|||||.|||||.|||...|.|:|.|:..::.||||||||.:.:.||:||.||:|:.|::||.||
  Rat   100 SSGPVVAMVWEGHNVVHISRAMIGHTDSTEAAPGTIRGDFSVHISRNVIHASDSVDGAQREIELW 164

  Fly   150 FNEKELVTW 158
            |...||:.|
  Rat   165 FQSSELLNW 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
awdNP_476761.3 PTZ00093 19..167 CDD:173387 77/139 (55%)
Nme4NP_001102948.1 NDPk_I 36..165 CDD:239876 72/128 (56%)

Return to query results.
Submit another query.