DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1896 and pdcd7

DIOPT Version :9

Sequence 1:NP_651886.1 Gene:CG1896 / 43738 FlyBaseID:FBgn0039870 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_001003415.1 Gene:pdcd7 / 445020 ZFINID:ZDB-GENE-040728-3 Length:508 Species:Danio rerio


Alignment Length:316 Identity:75/316 - (23%)
Similarity:118/316 - (37%) Gaps:91/316 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KHRLSEVKAKIQQVISSLGQLEQQSCGAGRD----FDVH-----RAEELQRSTATLLDELDQVPG 62
            |..:||.|.|:...:..|..| ...|...:|    .||.     :|.|::.:....|.:|.: |.
Zfish   194 KPSISEFKEKLYGTVQMLADL-NLFCRRLKDNLENEDVWTETLLKATEMKNNLQKRLKDLKE-PD 256

  Fly    63 --------QQVVDEQKQRKRRRRLYRRSQHRVIRA-TVKSEAAEQKFSI-------EPPRNTALE 111
                    .|.|::::.|.|||::.:..:.:...| ..:.||...|:.:       |..|...|:
Zfish   257 CISSVQRKLQQVNKKRARMRRRKMEQMEEKQEQEARRAEREAEIDKWQMKRFQEVEEKNREKELK 321

  Fly   112 QAKHISL----RKQRDAASILETFDLLEKLCESR--------------GGDR--------AALCQ 150
            .|....|    :||.||..:|:....||||.:.|              ..||        .:|.:
Zfish   322 LAADAVLSEVRKKQSDAKRMLDILKSLEKLRKLRKEAAARKGLFPGKESDDRFEGHLERLRSLIR 386

  Fly   151 KLT--------HMRLVWRRVQEE----TQAGHVK-ESKKVASLESQWKAVFFGRSLPT------- 195
            |.|        .:|::....|||    .|...:| |..|:...:.:..|:.||..|||       
Zfish   387 KRTAVYDTEEKALRVMLEGEQEEERKRDQDRRLKRERDKLLQKKRELHAMLFGAELPTDHPLQPF 451

  Fly   196 -----------PKLNKGKFLEIRSTWDSYISYCGR--GSSIPRGWVLPPTKPTAQW 238
                       |.|     :|||..||.::.....  |:|||.||::|.......|
Zfish   452 LDYYTQAERSLPAL-----IEIRREWDQFLVSVDHPDGTSIPNGWIVPEPPADEIW 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1896NP_651886.1 PDCD7 <160..242 CDD:292640 28/104 (27%)
pdcd7NP_001003415.1 PDCD7 195..506 CDD:292640 74/315 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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