DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1890 and tbca

DIOPT Version :9

Sequence 1:NP_651885.1 Gene:CG1890 / 43737 FlyBaseID:FBgn0039869 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_001163966.1 Gene:tbca / 100038159 XenbaseID:XB-GENE-490490 Length:108 Species:Xenopus tropicalis


Alignment Length:107 Identity:45/107 - (42%)
Similarity:73/107 - (68%) Gaps:0/107 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDPRIRQLVIKSGVVRRLTREKYCYAKEVLTEQARLEKLRGDGADDHVLRKQEEVIQECIMMVP 65
            |.|||:||:.||:|||:||.:||..|.||...::.::|:::.:|.|:::::||.|::||..||:|
 Frog     1 MADPRLRQIKIKTGVVKRLAKEKIMYEKEAKQQEEKIEQMKSEGGDEYIIKKQTEILQESRMMIP 65

  Fly    66 DSKRRLQKEYEVLEKYLADEQDLIETDSYKKAAEILKDAKAE 107
            |..|||:..|..|.:.|.:|::|.|.:.||.|..:|...|.|
 Frog    66 DCHRRLEAAYADLTQLLENEKELEEKEEYKDARSMLDSVKLE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1890NP_651885.1 TBCA 9..94 CDD:281033 33/84 (39%)
tbcaNP_001163966.1 TBCA 9..80 CDD:367276 29/70 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8322
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3388
Inparanoid 1 1.050 101 1.000 Inparanoid score I4859
OMA 1 1.010 - - QHG59154
OrthoDB 1 1.010 - - D1471374at2759
OrthoFinder 1 1.000 - - FOG0003240
OrthoInspector 1 1.000 - - oto103793
Panther 1 1.100 - - LDO PTHR21500
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2310
SonicParanoid 1 1.000 - - X4256
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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