DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eEF1alpha2 and 42Sp50

DIOPT Version :9

Sequence 1:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001011438.1 Gene:42Sp50 / 496924 XenbaseID:XB-GENE-5853280 Length:463 Species:Xenopus tropicalis


Alignment Length:457 Identity:307/457 - (67%)
Similarity:379/457 - (82%) Gaps:5/457 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
            :|.|:|:|:|||||||||||||||||||||.|.|.:||.|..|.::||||||:||:|||||||||
 Frog     7 QKTHLNVVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKGSFKFAWILDKLKAERE 71

  Fly    69 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133
            |||||||:||||:|:::.:|||||||||||||||||||||||.|:|:|:|.|||||||:|:||||
 Frog    72 RGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQT 136

  Fly   134 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISGWHG 198
            |||||||:|:||||:||.|||||.|:||||..|::|:.:.|:.|:|||||||.::.|||:|||.|
 Frog   137 REHALLAYTMGVKQMIVCVNKMDLTDPPYSHKRFDEVVRNVTVYLKKIGYNPTTIPFVPVSGWTG 201

  Fly   199 DNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVP 263
            :|:..||:||.|||||.|:||:|..:|:.|::.|||::||.||.:||||||||||||||||||||
 Frog   202 ENISSPSQKMGWFKGWKVKRKDGFTKGQSLLEVLDALVPPVRPANKPLRLPLQDVYKIGGIGTVP 266

  Fly   264 VGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGD 328
            ||::|||:|||||.:.|||.....||||:|||||.|..|.||.||||||||::||.|:||.|||:
 Frog   267 VGKIETGILKPGMTITFAPSGFAAEVKSIEMHHEPLQTAFPGFNVGFNVKNIAVKSLKRGNVAGN 331

  Fly   329 SKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKA 393
            ||::||..|:.||||||:|||||.|..||:||:|||||||.|:|:|::||.||||||..|..|..
 Frog   332 SKSDPPTEASSFTAQVIILNHPGLIKAGYSPVIDCHTAHITCQFTELQEKIDRRTGKKLEDNPGV 396

  Fly   394 IKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVTKAAEKA 458
            :||||||||.|.|.||.|||.|.::|||||||.||::|||||||:|||..|...:     |..:|
 Frog   397 LKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHKAGAA-----ARRQA 456

  Fly   459 QK 460
            ||
 Frog   457 QK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 303/445 (68%)
42Sp50NP_001011438.1 PTZ00141 7..447 CDD:185474 302/439 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62187
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 1 1.000 - - FOG0000314
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

Return to query results.
Submit another query.