DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha2 and mRRF2

DIOPT Version :9

Sequence 1:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster


Alignment Length:494 Identity:103/494 - (20%)
Similarity:173/494 - (35%) Gaps:160/494 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73
            ||.::.|:|:||:|||..:::..|    :|     :...|:.:|:    .|.|.|..||||||||
  Fly    35 NIGILAHIDAGKTTTTERMLFYAG----KT-----RALGEVHRGN----TVTDYLTQERERGITI 86

  Fly    74 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA-GISKNGQTREHA 137
            ..:...|..:.:.:.::|.|||.||...:.......| .|::|..||...|| .::...|..:|.
  Fly    87 CSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVD-GVVVVLDGTAGVEAQTVTVWSQADKHK 150

  Fly   138 LLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPIS-------- 194
            |        ..::.|||||..:        .:.:|.||....|:...|..:.: |:.        
  Fly   151 L--------PRLIFVNKMDRPD--------ADFEKCVSDLKDKLETQPVCLQY-PVKNEDGVLAI 198

  Fly   195 ---------GWHGDNM--------LEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPT 242
                     .|...::        ||||:.:...:   .:|.|       |||.|..:      .
  Fly   199 NDVITLERLSWQQKDLGRSYRNVKLEPSDDLRLLQ---EKRNE-------LIDQLSGL------D 247

  Fly   243 DKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDN 307
            |:     |.||.    |.|.....|:..|::..:      ....|:.|.|.:            .
  Fly   248 DE-----LADVV----ISTESFDNVDNALIERAL------RRATTQQKVVPV------------L 285

  Fly   308 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTP-------VLDCHT 365
            :|...|||.::.|.                              ...|.|.|       :.||..
  Fly   286 LGSAYKNVGIQRLM------------------------------DAVNAYLPAPEERNQIYDCFG 320

  Fly   366 AHIACKFSEIKEKCDRRTGKTT---------ETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPL 421
            ..:|.|..:|..  |::.|..|         :...:.|.:...|.:|....:||..|        
  Fly   321 TEVAGKVFKIVH--DKQRGPLTLVRILRGEIKRGMRLISARGQAEVVSKLYEPLADE-------- 375

  Fly   422 GRFAVRDMRQTVAVGVIKSVNFKETTSGKVTKAAEKAQK 460
                .|::....:..|:.....|.|.:|.:..:::.|.|
  Fly   376 ----YREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALK 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 100/482 (21%)
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 103/494 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464603
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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