DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha2 and waw

DIOPT Version :9

Sequence 1:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster


Alignment Length:427 Identity:98/427 - (22%)
Similarity:156/427 - (36%) Gaps:113/427 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 65
            |..|:|. |..:|.|||.||||....|:...|.|           |:..|:..     |||.|:.
  Fly    94 MPVERIR-NFSIIAHVDHGKSTLADRLLELTGAI-----------ARNGGQHQ-----VLDNLQV 141

  Fly    66 ERERGITIDIALWKFETSK---------YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
            |||||||:     |.:|:.         |.:.:||.|||.||...:....:..|..||:|.|..|
  Fly   142 ERERGITV-----KAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHG 201

  Fly   122 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPA 186
             .:|....|....:...||       ::..:||:|     ...|..:::.:::...   .|.:| 
  Fly   202 -VQAQTVANYHLAKQRQLA-------VVPVLNKID-----IKHANPDQVCQDLKLL---FGIDP- 249

  Fly   187 SVAFVPISGWHGDNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQ 251
                        |.:|..|.|:            |....:.|...::.:.|||...|...|..:.
  Fly   250 ------------DEVLRVSAKL------------GTGVSEVLERVIETVPPPQVQRDSDFRALIF 290

  Fly   252 DVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEA---LTEAMPGDNVGF--- 310
            |.:.....|.:.:..|..|.|:....:.......|..|||:.:...|   :.:...| .||.   
  Fly   291 DSWFDKYRGALNLIYVLNGKLEQNQDIQSLATKKVYSVKSISVLRPAECPVPDVSAG-QVGLIAC 354

  Fly   311 NVKNVSVKELRRGYVAGDS---KNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKF 372
            |::|      .:..:.||:   ||.....|..:..|     .|...| |..|.  ..:.|:|   
  Fly   355 NMRN------SKESIVGDTIHLKNQAVAAAGSYRPQ-----QPLVFA-GVFPA--DQSKHVA--- 402

  Fly   373 SEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKP 409
              ::...|:            :...|:|:.|.:.|.|
  Fly   403 --LRSAIDK------------MVLNDSAVTVKIDSSP 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 98/427 (23%)
wawNP_001027089.1 PRK05433 94..695 CDD:235462 98/427 (23%)
LepA 100..277 CDD:206677 57/239 (24%)
EF4_II 285..370 CDD:293900 18/91 (20%)
EF4_III 386..461 CDD:293917 12/60 (20%)
lepA_C 502..581 CDD:239680
LepA_C 589..695 CDD:283959
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464634
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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