DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha2 and eEF2

DIOPT Version :9

Sequence 1:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_525105.2 Gene:eEF2 / 35422 FlyBaseID:FBgn0000559 Length:844 Species:Drosophila melanogaster


Alignment Length:561 Identity:126/561 - (22%)
Similarity:194/561 - (34%) Gaps:197/561 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 65
            |.|::...|:.||.|||.||||.|..|:.|.|.|          ...:.|:..|     .|..|.
  Fly    13 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGAKAGETRF-----TDTRKD 62

  Fly    66 ERERGITID---IALWKFETSK------------------YYVTIIDAPGHRDFIKNMITGTSQA 109
            |:||.|||.   |::: ||..:                  :.:.:||:|||.||...:.......
  Fly    63 EQERCITIKSTAISMY-FEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVT 126

  Fly   110 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD--------STEPPYS--E 164
            |.|:::|     :..:|:....:|.....:|..:   :.|:.:||||        ..|..|.  :
  Fly   127 DGALVVV-----DCVSGVCVQTETVLRQAIAERI---KPILFMNKMDRALLELQLDAEELYQTFQ 183

  Fly   165 ARYEEIKKEVSSY------IKKIGYNPA--SVAFVPISGWHG--------DNMLEPSEKMP---- 209
            ...|.:...:::|      :.::..:|:  ||.|.  ||.||        ..|.  |||..    
  Fly   184 RIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFG--SGLHGWAFTLKQFSEMY--SEKFKIDVV 244

  Fly   210 ------W--------FKGWSVERKEGKAEGKC--LIDAL----DAILPPQRPTDKPLRLPLQDVY 254
                  |        .|.|..:::.......|  ::|.:    |||:.                |
  Fly   245 KLMNRLWGENFFNAKTKKWQKQKEADNKRSFCMYILDPIYKVFDAIMN----------------Y 293

  Fly   255 KIGGIGTV--PVG---------RVETGLLKPGM---------VVNFAPVNLVTEVKSVEMHHEAL 299
            |...|||:  .:|         :....|||..|         ::....::|.:.|.:.:...|.|
  Fly   294 KKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEML 358

  Fly   300 TEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANG-------- 356
            .|....|.....||:.........|:   ||..|......|.|...|.  .|::|.|        
  Fly   359 YEGPHDDEAAIAVKSCDPDGPLMMYI---SKMVPTSDKGRFYAFGRVF--AGKVATGQKCRIMGP 418

  Fly   357 -YTPVLDCHTAHIACKFSEIKEKCDRRT----GKTTETEPKAIKSGDAAIIVLVPSKPLC----V 412
             |||          .|..::.||..:||    |:..|    ||:.        |||..:|    |
  Fly   419 NYTP----------GKKEDLYEKAIQRTILMMGRYVE----AIED--------VPSGNICGLVGV 461

  Fly   413 ESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVTK 453
            :.|                .|..|.|  ..||:..:.||.|
  Fly   462 DQF----------------LVKTGTI--TTFKDAHNMKVMK 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 123/556 (22%)
eEF2NP_525105.2 PTZ00416 1..844 CDD:240409 126/561 (22%)
EF2 20..236 CDD:206672 59/243 (24%)
EF2_snRNP_like_II 380..474 CDD:293901 31/138 (22%)
EF2_snRNP_III 489..560 CDD:293918
aeEF2_snRNP_like_IV 560..732 CDD:238839
eEF2_snRNP_like_C 728..807 CDD:239763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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