DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1alpha2 and eRF3

DIOPT Version :9

Sequence 1:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001260415.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster


Alignment Length:443 Identity:166/443 - (37%)
Similarity:255/443 - (57%) Gaps:28/443 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 71
            |:|:|.|||||:||||..|.::...|.:||||:||:|:||:|..:.|:..:|.||..:.||::|.
  Fly   195 HVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRESWYLSWALDTNQEERDKGK 259

  Fly    72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 136
            |:::....|||.:.:.||:|||||:.|:.|||.|.:|||.|||:::|..||||.|..:.||||||
  Fly   260 TVEVGRAFFETDRKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREH 324

  Fly   137 ALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPA-SVAFVPISGWHGDN 200
            |:||.|.|||.|:|.|||||.....:.:.||.|.|.::..|:||:|:||| .:.|:|.||..|..
  Fly   325 AMLAKTAGVKHLVVLVNKMDDPTVNWDQTRYNECKDKILPYLKKLGFNPAKDLTFMPCSGLSGYG 389

  Fly   201 MLE--PSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVP 263
            :.:  |....||::            |...|..:|.:....|.:|.|..:|:.|.||  .:|||.
  Fly   390 LKDQIPETLCPWYR------------GPAFIPFIDELPSLNRKSDGPFIMPIVDKYK--DMGTVV 440

  Fly   264 VGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGD 328
            :|:||:|..:.|..:...|......|..:......:|...||:||...:|.:..:::..|:|..|
  Fly   441 MGKVESGTARKGQNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEEDVSPGFVLCD 505

  Fly   329 SKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKC-----DRRTGKTTE 388
            :. ||.:....|.|||::|.|...|..||:.|:     ||.|...|:..|.     |:::|..::
  Fly   506 AA-NPIKTGKIFDAQVVILEHKSIICAGYSAVM-----HIHCAAEEVTVKALICLVDKKSGDKSK 564

  Fly   389 TEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSV 441
            |.|:.:|....||:.:..|..:|:|.|:.||.:|||.:||..:|:|:|.:..|
  Fly   565 TRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKVLKV 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 166/443 (37%)
eRF3NP_001260415.1 PAM2 12..28 CDD:284542
TEF1 191..619 CDD:227581 166/443 (37%)
EF1_alpha 197..416 CDD:206670 100/230 (43%)
eRF3_II 424..505 CDD:293906 23/82 (28%)
eRF3_C_III 511..617 CDD:294003 36/110 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464636
Domainoid 1 1.000 131 1.000 Domainoid score I241
eggNOG 1 0.900 - - E1_COG5256
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I210
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1150082at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm51361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
98.900

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