Protein Alignment CstF50 and AT5G60940

DIOPT Version :10

• Sequence 1: NP_651883.1
• Gene: CstF50 / 43734
• FlyBaseID: FBgn0039867
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: NP_200902.1
• Gene: AT5G60940 / 836215
• AraportID: AT5G60940
• Length: 429
• Species: Arabidopsis thaliana
• Alignment Length: 447
• Identity: 142/447 - (31%)
• Similarity: 232/447 - (51%)
• Gaps: 61/447 - (13%)

  Fly     3 DEILDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQC-----APSERLLHVMIAGMQ 62
            ::.|...|:.:.   |..|:::.|.:..|.:.|   |.:..|...     .|..|||.::..|:
plant     8 EQALQDGNIFRQ---LNALIVAHLRHHNLSQVA---SAVASATMTPLNIEVPPNRLLELVAKGL- 65

  Fly    63 TLSDKDKTNSDDVLPGIDLEFEPEASALAPEPH--------------------------SYETAY 101
                  ...::..|.|:      .:|.|.|..:                          .:|:..
plant    66 ------AAENNGTLRGV------SSSVLLPSSYGSITTPRTASIDFSVNHAKGSSKTIPKHESKT 118

  Fly   102 VTSHKQACRAGAFSCDGSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHT 166
            ::.||...|...||.||...|||..|.|||:.:|.::      :.:..| :.|..|:|||.|||.
plant   119 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKV------KQMISG-DTQARPLIRTFYDHA 176

  Fly   167 DEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEH 231
            :.::.|:|||:..||.|:::|..:|.||.:|.:.|:|.|||.|...|..:||||:|:::..||:|
plant   177 EPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDH 241

  Fly   232 NVLRVYDVATTQCFV-SAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAE 295
            .:..:|||.|.|||: |..|.......:..|:||.||.:|.|.|.||.|:::||:|.:|:.:|..
plant   242 PIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGN 306

  Fly   296 AHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQTEAVFNHTEDY 360
            |||.:.:.|..||::.:::||||.||.|.|||:.:.|.::.|.||   .:.:.:::|:||.||::
plant   307 AHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGA---KRVKLRSQAIFNDTEEF 368

  Fly   361 VLFPDEATTSLCSWNSRNGCRLTLNSLGHNGPVRYITHSPNGPAFLTCSDDFRARFW 417
            |:..|||:..:.:|::|...::......|||..|:|.|||....|:||..|...|||
plant   369 VISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF50	NP_651883.1	CSTF1_dimer	10..63	CDD:465240	13/57 (23%)
		WD40	98..417	CDD:238121	121/319 (38%)
		WD40 repeat	113..164	CDD:293791	18/50 (36%)
		WD40 repeat	170..208	CDD:293791	16/37 (43%)
		WD40 repeat	213..251	CDD:293791	17/38 (45%)
		WD40 repeat	259..295	CDD:293791	16/35 (46%)
		WD40 repeat	302..338	CDD:293791	14/35 (40%)
		WD40 repeat	392..417	CDD:293791	10/24 (42%)
AT5G60940	NP_200902.1	WD40	115..426	CDD:238121	123/321 (38%)
		WD40 repeat	128..174	CDD:293791	18/52 (35%)
		WD40 repeat	180..216	CDD:293791	14/35 (40%)
		WD40 repeat	223..262	CDD:293791	17/38 (45%)
		WD40 repeat	270..306	CDD:293791	16/35 (46%)
		WD40 repeat	313..349	CDD:293791	14/35 (40%)
		WD40 repeat	357..398	CDD:293791	11/40 (28%)