DRSC/TRiP Functional Genomics Resources

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Protein Alignment CstF50 and CG14722

DIOPT Version :10

Sequence 1:NP_651883.1 Gene:CstF50 / 43734 FlyBaseID:FBgn0039867 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_650111.3 Gene:CG14722 / 41419 FlyBaseID:FBgn0037943 Length:498 Species:Drosophila melanogaster


Alignment Length:356 Identity:63/356 - (17%)
Similarity:123/356 - (34%) Gaps:108/356 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQCAPSERLLHVMIAGMQTLSDKDKTN 71
            :||...|..|..:.|...    |..::....:...:|..:.:|.|..|...|..:....|:|...
  Fly   112 NPSGSNKQPEATFDLDED----DETDETVRAMIAAIKKPRSSPPEIKLEDFITDICFHPDRDIIA 172

  Fly    72 SDDVLPGIDL-EFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCDGSLVATGSVDASIKILDV 135
            ...::..:.| |::.||:.|        ...:..|.:|||...|:.||..:.|.|.|..:.:.|:
  Fly   173 LATIIGDVHLYEYDNEANKL--------LRTIEVHSKACRDVEFTEDGRFLLTCSKDKCVMVTDM 229

  Fly   136 E----RMLAKSAPEDIEPGREQQGHPVIRTLY-------------------------------DH 165
            |    :.|.::|.:|           .|.||:                               :.
  Fly   230 ETEKLKKLYETAHDD-----------AINTLHVLNENLFASGDDAGTVKLWDLRTKNAIFELKEL 283

  Fly   166 TDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEP----VLCLSFHPTGDYVA 226
            .|:::.|..:.:..:|.:.|.||.:..|:|:      |.|::...||    :.|:..:.....:.
  Fly   284 EDQITQLTTNEQSKLLLATSADGYLTTFNIS------ARKMYVQSEPYEEELNCMGVYRGDSKLV 342

  Fly   227 IGTEHNVLRVY-----------------------------------DVATTQCFVSAIPS----Q 252
            :||....|..|                                   |.....|.::...:    .
  Fly   343 VGTSKGRLYTYNWGQFGYHCDMYPGIKSPISLMIPITDRIACVAGEDGNIRACHIAPYRNLGVVG 407

  Fly   253 QHKAGVTCVKYSPTGKLYATGSYDGDIKIWD 283
            ||...:..:..:.:|:|.|:.|::.|::.|:
  Fly   408 QHNMPIESLDVNASGELIASSSHNNDVRFWN 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CstF50NP_651883.1 CSTF1_dimer 10..63 CDD:465240 9/52 (17%)
WD40 98..417 CDD:238121 45/264 (17%)
WD40 repeat 113..164 CDD:293791 14/85 (16%)
WD40 repeat 170..208 CDD:293791 9/37 (24%)
WD40 repeat 213..251 CDD:293791 7/72 (10%)
WD40 repeat 259..295 CDD:293791 6/25 (24%)
WD40 repeat 302..338 CDD:293791
WD40 repeat 392..417 CDD:293791
CG14722NP_650111.3 WD40 156..438 CDD:475233 52/306 (17%)
WD40 repeat 160..198 CDD:293791 7/45 (16%)
WD40 repeat 203..239 CDD:293791 11/35 (31%)
WD40 repeat 247..284 CDD:293791 2/36 (6%)
WD40 repeat 287..354 CDD:293791 15/72 (21%)
WD40 repeat 367..406 CDD:293791 2/38 (5%)
WD40 repeat 413..437 CDD:293791 5/23 (22%)
Blue background indicates that the domain is not in the aligned region.

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