Protein Alignment CstF50 and cstf1

DIOPT Version :10

• Sequence 1: NP_651883.1
• Gene: CstF50 / 43734
• FlyBaseID: FBgn0039867
• Length: 424
• Species: Drosophila melanogaster
• Sequence 2: NP_001001220.1
• Gene: cstf1 / 407896
• XenbaseID: XB-GENE-970048
• Length: 431
• Species: Xenopus tropicalis
• Alignment Length: 423
• Identity: 230/423 - (54%)
• Similarity: 289/423 - (68%)
• Gaps: 15/423 - (3%)

  Fly    12 VKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQTLSDKDKT----- 70
            :|:|:.||:|:|||::|||....|..|...:|... |||||:|||::..||:  :|....
 Frog     8 LKDRQQLYKLIISQMLYDGYINIANGLISELKIHSVCAPSEQLLHLIKVGME--NDDSAVQYAIG 70

  Fly    71 NSDDVLP--GIDLEFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCDGSLVATGSVDASIKIL 133
            .||.|.|  ||||||:.:...::||...|||.||||||..||...:|.||.|:||||.|||||||
 Frog    71 RSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKIL 135

  Fly   134 DVERMLAKSA-PEDI---EPGRE-QQGHPVIRTLYDHTDEVSYLEFHPKEHILASASRDGTVKLF 193
            |.|||||||| |.::   |..:: .:.||||||||||.|||:.|.|||.|.||||.|:|.|:|||
 Frog   136 DTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSKDYTLKLF 200

  Fly   194 DIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGV 258
            |.:|||.|:|.|...:.|.:..:||||:||::.:||:|..||:||:.|.|||||..|..||...:
 Frog   201 DYSKPSAKRAFKYIQEAEMLRSISFHPSGDFIIVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAI 265

  Fly   259 TCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLV 323
            ..|.|:|:...|.|.|.||.||:|||:|.|||.|..:||.||.:||..|::|.||:||||.||:.
 Frog   266 CSVNYNPSANTYVTCSKDGSIKLWDGVSNRCITTYEKAHDGAEVCSAIFSKNSKYILSSGKDSVA 330

  Fly   324 YLWELCTSRPIQTYTGAGTTGKQEHQTEAVFNHTEDYVLFPDEATTSLCSWNSRNGCRLTLNSLG 388
            .|||:.|.|.:..|||||.:|:|.|:|:|||||||||||.|||.|.|||.|:||...|..|.|||
 Frog   331 RLWEISTGRMLVKYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLG 395

  Fly   389 HNGPVRYITHSPNGPAFLTCSDDFRARFWYRRA 421
            ||..||.|.|||..|.|:||||||||||||||:
 Frog   396 HNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRS 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CstF50	NP_651883.1	CSTF1_dimer	10..63	CDD:465240	24/51 (47%)
		WD40	98..417	CDD:238121	187/323 (58%)
		WD40 repeat	113..164	CDD:293791	33/55 (60%)
		WD40 repeat	170..208	CDD:293791	22/37 (59%)
		WD40 repeat	213..251	CDD:293791	19/37 (51%)
		WD40 repeat	259..295	CDD:293791	18/35 (51%)
		WD40 repeat	302..338	CDD:293791	17/35 (49%)
		WD40 repeat	392..417	CDD:293791	17/24 (71%)
cstf1	NP_001001220.1	CSTF1_dimer	8..59	CDD:465240	23/50 (46%)
		WD40	100..424	CDD:238121	187/323 (58%)
		WD40 repeat	116..171	CDD:293791	33/54 (61%)
		WD40 repeat	177..215	CDD:293791	22/37 (59%)
		WD40 repeat	220..259	CDD:293791	20/38 (53%)
		WD40 repeat	266..301	CDD:293791	18/34 (53%)
		WD40 repeat	309..345	CDD:293791	17/35 (49%)
		WD40 repeat	356..393	CDD:293791	24/36 (67%)
		WD40 repeat	400..424	CDD:293791	17/23 (74%)