DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11550 and clvs2

DIOPT Version :9

Sequence 1:NP_651882.1 Gene:CG11550 / 43731 FlyBaseID:FBgn0039864 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001020716.1 Gene:clvs2 / 566769 ZFINID:ZDB-GENE-041014-313 Length:329 Species:Danio rerio


Alignment Length:315 Identity:65/315 - (20%)
Similarity:130/315 - (41%) Gaps:46/315 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PEIRRPEVLKFLDWIHAQPHISD-RFSEGEALHFFHACRYSMEVAKQVLDTNLTARTHLEEFFVN 77
            |:....::.:..|.|..:|.|.. |..:...|.|..|.:::...|.::|......|....:.|.|
Zfish    24 PDTLHQDIQEVRDMIITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLLAQYFEYRQQNLDMFKN 88

  Fly    78 LDCERPEIRRAMRTVSIVPLPGATPEGYRVILAKLD------------DLNTSNYNFADVMKLYC 130
            |....|.|::|::            :|:..:|:.||            :.:.|.|.|.|:::...
Zfish    89 LKATDPGIKQALK------------DGFPGVLSNLDRYGRKILVLFAANWDQSRYTFVDILRAIL 141

  Fly   131 MVFDFWMYEDGIQ-PGHVIVIDLKNTSLGHVARIGLLQMKKFLYYLQEAAAIRLIGFHFINIVPF 194
            :..:..:.:..:| .|.|::||..|.:....:::....::..:..||::...|..|.||:|...:
Zfish   142 LSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWY 206

  Fly   195 MDKILALMTPFMKKELTTVLHMH-SDLKEFYKFVPQEMLPKEYGGQL------------------ 240
            :..:..::.||:|.:....:.|| ::|...::.:..|:||.|.||.|                  
Zfish   207 IHALYTVIRPFLKDKTRKRIFMHGNNLNSLHQLILPEILPSELGGMLPPYDMGTWARTLLDHAYD 271

  Fly   241 EEANVAKEIYYKKLLDNRKEMIEFETRHQVNEKLRPGKAKNASDLFGIEGNFKKL 295
            ||.:...|.|...:.|..|::.. :|..:....:.||..|....:...|.|.:.|
Zfish   272 EETDYCPESYTLSVKDLEKDLSP-KTMKRSQSVVEPGVLKRPEKVKSEEENMQPL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11550NP_651882.1 CRAL_TRIO 94..239 CDD:279044 32/158 (20%)
clvs2NP_001020716.1 CRAL_TRIO_N 29..75 CDD:215024 10/45 (22%)
SEC14 106..251 CDD:238099 30/144 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..329 7/34 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.