DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11550 and rlbp1

DIOPT Version :10

Sequence 1:NP_651882.1 Gene:CG11550 / 43731 FlyBaseID:FBgn0039864 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:216 Identity:50/216 - (23%)
Similarity:103/216 - (47%) Gaps:15/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LHFFHACRYSMEVAKQVLDTNLTARTHLEEFFVNLDCERPEIRRAMRTVSIVPLPG----ATPEG 104
            |.|..|.::.:..|.::|...:..|....|.|.:|   .||   |:|:......||    ....|
 Frog    97 LRFIRARKFDVSRAYELLKGYVNFRQQYPELFEDL---TPE---AVRSTIEAGYPGILTSRDKNG 155

  Fly   105 YRVILAKLDDLNTSNYNFADVMKLYCMVFDFWMYEDGIQ-PGHVIVIDLKNTSLGHVARIGLLQM 168
            ..::|..::..:.....|.::::.||::.:..:..:..| .|..|:.:.|..::...:.|...::
 Frog   156 RVILLFNIESWDYEEITFDEILRAYCIILESLLENEETQINGFCIIENFKGFTMQQASGIKPSEL 220

  Fly   169 KKFLYYLQEAAAIRLIGFHFINIVPFMDKILALMTPFMKKELTTVLHMH-SDLKEFYKFVPQEML 232
            ||.:..||::...|....|||:...:......::.||:|.:|...:.:| .||:.|||.:..::|
 Frog   221 KKMVDMLQDSFPARFKAVHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADIL 285

  Fly   233 PKEYGGQLEEAN---VAKEIY 250
            |.::||.|.:.:   :|:|::
 Frog   286 PADFGGNLPKYDGKIIAEELF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11550NP_651882.1 CRAL_TRIO 94..238 CDD:459890 32/149 (21%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 5/19 (26%)
SEC14 141..292 CDD:469559 33/150 (22%)

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