Protein Alignment CG11550 and Ku80

DIOPT Version :9

• Sequence 1: NP_651882.1
• Gene: CG11550 / 43731
• FlyBaseID: FBgn0039864
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_609767.2
• Gene: Ku80 / 34930
• FlyBaseID: FBgn0041627
• Length: 699
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 52/279 - (18%)
• Similarity: 94/279 - (33%)
• Gaps: 101/279 - (36%)

  Fly     3 EANLEDQ-YASFPEIRRPEVLKFLDWIHAQPHISDRFSE------GEALHFF---HACRYSMEVA 57
            :|.||.| .|:...:.|..:|...|: :..|...::|:|      ||.:...   |...|
  Fly   104 QAALELQNVATTLRVARRRILLLFDF-NDFPQDYEKFNEITDELLGENIELIVGTHNIAY----- 162

  Fly    58 KQVLDTNLTARTHLEEFFVNLDCERPEIRRAMRTVSIVPLPGATPEGYRVILAKLDDLNTSNYNF 122
               :|..:|::.. ..|..:..|...|:......:|:||...||...::      :.|:|
  Fly   163 ---IDNAITSQPQ-AIFNFSRKCGPDELNNQKYALSLVPRCNATLCSFK------EALHT----- 212

  Fly   123 ADVMKLYCMVFDF-----WMYEDGIQPGHVIVIDLKNTSLGHVARIGLLQMKKFLYYLQEAAAIR 182
                     ||..     |::...:..|..|.|.|:          |::.||       ....::
  Fly   213 ---------VFKVTNRRPWVWNAKLNIGSKISISLQ----------GIIAMK-------NQTPVK 251

  Fly   183 LIGF-------------HFI---NIVPFMDKIL--------------ALMTPFMKKELTTVLHMH 217
            |:..             |:|   .|.|..:.::              |::.|  |:.....||
  Fly   252 LVKVWAEKDEIVIRETRHYIKGTEITPLPENLITGYMLGGTPVPYDEAVLEP--KEPHPPGLH-- 312

  Fly   218 SDLKEFYKFVPQEMLPKEY 236
                 |:.|:.:..:|.||
  Fly   313 -----FFGFIKRNAVPDEY 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11550	NP_651882.1	CRAL_TRIO	94..239	CDD:279044	31/178 (17%)
Ku80	NP_609767.2	Ku_N	7..213	CDD:281693	27/138 (20%)
		KU80	221..524	CDD:238445	23/132 (17%)
		Ku_PK_bind	562..663	CDD:285938

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900