DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11550 and Rlbp1

DIOPT Version :9

Sequence 1:NP_651882.1 Gene:CG11550 / 43731 FlyBaseID:FBgn0039864 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001166954.1 Gene:Rlbp1 / 19771 MGIID:97930 Length:317 Species:Mus musculus


Alignment Length:264 Identity:56/264 - (21%)
Similarity:116/264 - (43%) Gaps:26/264 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EDQYASFPEIRRPEVLKFLDWIHAQP--------HISDRFSEGEA---LHFFHACRYSMEVAKQV 60
            :|:.....|.|...|.:..:.:.||.        .:::|....::   |.|..|.::.:..|.::
Mouse    49 KDELNEKEETREEAVRELQELVQAQAASGEELALAVAERVQARDSAFLLRFIRARKFDVGRAYEL 113

  Fly    61 LDTNLTARTHLEEFFVNLDCERPEIRRAMRTVSIVPLPGATPE----GYRVILAKLDDLNTSNYN 121
            |...:..|....|.|.:|..|      |:|.......||....    |..|:|..:::.:.....
Mouse   114 LKGYVNFRLQYPELFDSLSME------ALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWHCEEVT 172

  Fly   122 FADVMKLYCMVFDFWMYEDGIQ-PGHVIVIDLKNTSLGHVARIGLLQMKKFLYYLQEAAAIRLIG 185
            |.::::.||.:.:..:..:..| .|..||.:.|..::...|.:....:||.:..||::...|...
Mouse   173 FDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKA 237

  Fly   186 FHFINIVPFMDKILALMTPFMKKELTTVLHMH-SDLKEFYKFVPQEMLPKEYGGQLEEAN---VA 246
            .|||:...:......::.||:|.:|...:.:| .||..|::.:.:.:||.::||.|.:.:   ||
Mouse   238 IHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVA 302

  Fly   247 KEIY 250
            ::::
Mouse   303 EQLF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11550NP_651882.1 CRAL_TRIO 94..239 CDD:279044 33/150 (22%)
Rlbp1NP_001166954.1 CRAL_TRIO_N 60..117 CDD:215024 9/56 (16%)
CRAL_TRIO 143..292 CDD:395525 33/148 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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