DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1815 and Zmynd8

DIOPT Version :9

Sequence 1:NP_651881.2 Gene:CG1815 / 43730 FlyBaseID:FBgn0039863 Length:1664 Species:Drosophila melanogaster
Sequence 2:XP_006235600.1 Gene:Zmynd8 / 296374 RGDID:1309544 Length:1261 Species:Rattus norvegicus


Alignment Length:1385 Identity:358/1385 - (25%)
Similarity:572/1385 - (41%) Gaps:356/1385 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 DPFCWKCRGCGKLMPCSKCLRSFHSYCVRPATTKFDSSWKCPEC------QVIEAAPKRLRRNGV 401
            |.:||.|...|:::.|..|.|.:|:.|:| .|::.:..|.||||      :.||...|.:..  :
  Rat   113 DFYCWVCHREGQVLCCELCPRVYHAKCLR-LTSEPEGDWFCPECEKITVAECIETQSKAMTM--L 174

  Fly   402 SVDLLSQLLSFALDRMKHV-RGAHKLRSPLEVFPLTYKKFFVNPVSFESLAQCIRNGAYQSTDEF 465
            :::.||.||.||:.:||.. ..|.:...|||..| .|.::..:|:...:|.:..:...|..|:.|
  Rat   175 TIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHP-DYAEYIFHPMDLCTLEKNAKKKMYGCTEAF 238

  Fly   466 LSEVKWIQHNALILDAGDAKVEQASKAVVKVCRQEANEIDTCPECYLNA-NSSDEWFVKVCRHPH 529
            |::.|||.||.:|.:.|:.|:.|.:|.|:|:|..|.|||:.||||||.| ...|.||.:.|.:||
  Rat   239 LADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPH 303

  Fly   530 LLLWAKLKGFPYWPAKAMGSSNSTLVNVRFFGKHDRAFVPVKDCFLYSAQNPNTQTSRRSARDLA 594
            .|:||||||||:|||||:...:.. |:.||||:||||:|||.:|:|.|.:.|.:....:|..:.|
  Rat   304 PLVWAKLKGFPFWPAKALRDKDGQ-VDARFFGQHDRAWVPVNNCYLMSKEIPFSVKKTKSIFNSA 367

  Fly   595 ECIREVEIHIDHIKRKIGAFNYAPYRTPYDPLEEQQQLEQMMPGVYAAIDRELEPAN------KT 653
              ::|:|:::::|::|.|.|||:|:||||.|..:.|.|              |:|:|      ||
  Rat   368 --MQEMEVYVENIRKKFGVFNYSPFRTPYTPNSQYQML--------------LDPSNPSAGTAKT 416

  Fly   654 PLQFLIR----KTADDKLSIVKKTKATESGNE---SDQSPSPTKKLSEVDVVSVTGSGCSDHSNV 711
            ..|..::    .||..|:.:.|...:..:|..   ||...|||...|.|.    |||        
  Rat   417 DKQEKVKLNFDMTASPKIILSKPLLSGGAGRRISLSDMPRSPTSTNSSVH----TGS-------- 469

  Fly   712 KSNNYEVISRSGESLTDSRCKVLLKRKSLAAKIVAESVETSEAVAPKRKHSLSDASFTSESSEHK 776
                                                .||..    |::|...|..|.:.||.:..
  Rat   470 ------------------------------------DVEQD----PEKKAPSSHFSASEESMDFL 494

  Fly   777 RKSKHARKQHDNQDNQIEEAEKTGQ--------EP--PKSPTISKQNENLRDEENVIENAANDTS 831
            .||..:           ..:.||||        :|  |::||             .|....:.||
  Rat   495 DKSTAS-----------PASTKTGQAGSLSGSPKPFSPQAPT-------------PIMTKPDKTS 535

  Fly   832 SASPVSASVVSVVELVRRRQGVTITKIPRE-QQQTAEDTAAVPIPLPTAPPPKQ-------NIPK 888
            :|:  :.|::: :.|.|.:..:.:.::... |||:|        |:|...|.:|       |:.|
  Rat   536 TAT--TGSILN-LNLDRSKAEMDLKELSESVQQQSA--------PVPLISPKRQIRSRFQLNLDK 589

  Fly   889 GNEAANPKQSDVERQQEQLIKKVIPFIEIKTEVMSEPDDEGI--EEASPANQPQTDQVPLQQETI 951
            ..|:.. .|..:....|.:...|.......:|.....|.|.:  ||..|.|:|:           
  Rat   590 TIESCK-AQLGINEISEDVYTAVEHSDSEDSEKSESSDSEYVSDEEQKPKNEPE----------- 642

  Fly   952 TAQPE----SQMPAAAPAPQPKPVDNAPFEEVRIKEEILSEDEMETEQSIVSRRLKSVP------ 1006
              .||    |::...|||.:.||   .|..:|.:|||:.|...:..:......:.|:.|      
  Rat   643 --DPEDKEGSRVDKEAPAIKRKP---KPSNQVEVKEEVKSNSPVGEKVDPAPAKDKASPEPEKDF 702

  Fly  1007 ---PMPLPMPPPPPLPPREESPATADSVRFVGDTTIQRVSQKQGGKSTDTGGKRKGVQQVPIAGI 1068
               ..|.|.|....|..::|:.:....:....|:..:.|.......|...|.|.|...:||    
  Rat   703 AEKAKPSPHPTKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDPSGREGRKNKKEPKVP---- 763

  Fly  1069 PQAPSPTHSPLLSTAPSPSASPKPTSTLAVSKPPPPPPPKGKSASHLQFRGKNDRIPTSPPATAP 1133
                                |||..   |:.|||||.|...:|.......   .|..|..||...
  Rat   764 --------------------SPKQD---AIGKPPPPTPAGNQSPPETPVL---TRSATQAPAAGV 802

  Fly  1134 PATNTSSLLRSNMVVIPVE---QGGSCNAHSPMTIPVPPLRAVSKNTLQNTSTGSTSS------- 1188
            ....|:|.:.:..|..|..   .|.......|: :|...:.||.:.....:|...|||       
  Rat   803 TVAATTSTMSTVTVTAPATAAVTGSPVKKQRPL-LPKETVPAVQRVVWNASSKFQTSSQKWHMQK 866

  Fly  1189 -------------CVPSSVSMPPPLAGL------SIPPV------ATPTSQEESITNSGQPVGLL 1228
                         ...|....|....|.      ::..|      .:|::...::..|.||..|:
  Rat   867 IQRQQQQQQQQQQQQQSQQQQPQSSQGTRYQTRQAVKAVQQKEVTQSPSTSTITLVTSTQPAALV 931

  Fly  1229 ASALNGTAN---DVLSSDSIPNDPITPGLATALSEMLLHTGVPKLIARPRGALRSDGSQIYPSQA 1290
            :|  :|:|:   .|:::| :|       :|||.:::.  ..:.|..::...|::...::||    
  Rat   932 SS--SGSASTLASVINAD-LP-------IATASADVA--ADIAKYTSKMMDAIKGTMTEIY---- 980

  Fly  1291 GPVSQKLKENAHKITDYFISVIEDTLSDMATGDQSVLQARIAGLSLENERLKQHYDRQINDLHRT 1355
                                   :.||...||...   |.|..|.:|.|:|:..:.:::.::...
  Rat   981 -----------------------NDLSKNTTGSTI---AEIRRLRIEIEKLQWLHQQELAEMKHN 1019

  Fly  1356 SELMISEMRKTLEQEHKRVISELRQQNAIELMRAVEEAKRKQWCANCMREAQLYCCWNTSYCDYP 1420
            .||.::|||::||||..|:|:|:::|..:|..:||:|.|:|||||||.:||..||||||||||||
  Rat  1020 LELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYP 1084

  Fly  1421 CQQLHWPGHSATCGQSVPPTIPVPPSVPTPIIEPGRAKAKVATPTATPSITNPSPSSQIMRTVAA 1485
            |||.|||.|..:|.||.  |.|           ...|.|:....|...:....|.::|      :
  Rat  1085 CQQAHWPEHMKSCTQSA--TAP-----------QQEADAEANQETGNKTSQGSSSNTQ------S 1130

  Fly  1486 CPSAPPSANASSSKKWPPMMTLMNQSNQEAMLKLPATTYLRPVVSTTMTAPVTAPQPANNNSTNV 1550
            .||.|    ||:.|:.....:..|.|:.|                          :..::|||..
  Rat  1131 APSEP----ASTPKEKETSSSSSNSSSTE--------------------------KSKDSNSTLD 1165

  Fly  1551 IMAPTPPP-----GNNLATIISAQRNPPNYNA----KHPNPAMPVQRFNIPLPITVNSNAPFMMA 1606
            :......|     |:|..::.......|.|..    ..|:|..|.|:::     :.:|.|....:
  Rat  1166 LSGSRETPSSILLGSNQGSVSKRYDKQPAYTPTTTDHQPHPNYPAQKYH-----SRSSKAGLWSS 1225

  Fly  1607 EQHQK---QVPKATGRSGKN 1623
            .:.::   :...:.|.|.||
  Rat  1226 SEEKRGSSRSEHSAGTSTKN 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1815NP_651881.2 PHD_PRKCBP1 345..386 CDD:277013 14/40 (35%)
Bromo_RACK7 403..501 CDD:99940 33/98 (34%)
BS69_related 520..603 CDD:99902 39/82 (48%)
zf-MYND 1399..1433 CDD:280009 25/33 (76%)
Med3 <1428..1664 CDD:288447 38/208 (18%)
Zmynd8XP_006235600.1 PHD_PRKCBP1 115..155 CDD:277013 14/40 (35%)
Bromo_RACK7 176..274 CDD:99940 33/98 (34%)
BS69_related 294..374 CDD:99902 39/82 (48%)
DUF3544 451..647 CDD:288884 59/296 (20%)
DUF1640 968..>1059 CDD:285090 30/120 (25%)
zf-MYND 1063..1097 CDD:280009 25/33 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337628
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 359 1.000 Inparanoid score I2148
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183667at33208
OrthoFinder 1 1.000 - - FOG0007933
OrthoInspector 1 1.000 - - oto97418
orthoMCL 1 0.900 - - OOG6_107396
Panther 1 1.100 - - LDO PTHR46453
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4437
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.800

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