DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1815 and Zmynd11

DIOPT Version :9

Sequence 1:NP_651881.2 Gene:CG1815 / 43730 FlyBaseID:FBgn0039863 Length:1664 Species:Drosophila melanogaster
Sequence 2:XP_006254212.1 Gene:Zmynd11 / 291259 RGDID:1303252 Length:673 Species:Rattus norvegicus


Alignment Length:1113 Identity:190/1113 - (17%)
Similarity:312/1113 - (28%) Gaps:568/1113 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 EPPTPGWDPFCWKCRGCGKLMPCSKCLRSFHSYCVRPATTKFDSS--WKCPECQVIEAAPKRLRR 398
            |..|..|  :|::|...|:::.|..|.|.:||.|:.......|||  |:||.|:.|:......:.
  Rat   110 ETETHDW--YCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRSIKKKHSNKQE 172

  Fly   399 NGVSVDLLSQLLSFALDRMK------HVRGAHKLRSPLEVFPLTYKKFFVNPVSFESLAQCIRNG 457
            .|.       .|.|.:.|||      :.:|... :.|:      |::...:.|...::.:.:..|
  Rat   173 MGT-------YLRFIVSRMKERAIDLNKKGKDS-KHPM------YRRLVHSAVDVPTIQEKVNEG 223

  Fly   458 AYQSTDEFLSEVKWIQHNALILDAGDAKVEQASKAVVKVCRQEANEIDTCPEC-YLNANSSDEWF 521
            .|:|.:||.::.:.:.||.:|....|::....::.:.|....|.:|:..|..| ||:....|.||
  Rat   224 KYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWF 288

  Fly   522 VKVCRHPHLLLWAKLKGFPYWPAKAMGSSNSTLVNVRFFG-KHDRAFVPVKDCFLYSAQNPNTQT 585
            ...|...|.|:|||:|||.:||||.|...::. |:||||| .|.||::|          :.|.| 
  Rat   289 CYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQ-VDVRFFGHHHQRAWIP----------SENIQ- 341

  Fly   586 SRRSARDLAECIREVEIHIDHIKRKIGAFNYAPYRTPYDPLEEQQQLEQMMPGVY---AAIDREL 647
                  |:.     |.:|..|:||.:|      ::...|.||..|:.  :..|.:   ...||..
  Rat   342 ------DIT-----VNVHRLHVKRSMG------WKKACDELELHQRF--LREGRFWKSKNEDRGE 387

  Fly   648 EPANKTPLQFLIRKTADDKLSIVKKTKATESGNESDQSPSPTKKLSEVDVVSVTGSGCSDHSNVK 712
            |.|..:     |..|::::|...::.:|.:  ...:||..|.|::|           |..||   
  Rat   388 EEAESS-----ISSTSNEQLKATQEPRAKK--GRRNQSVEPKKEVS-----------CPPHS--- 431

  Fly   713 SNNYEVISRSGESLTDSRCKVLLKR-KSLAAKIVAESVETSEAVAPKRKHSLSDASFTSESSEHK 776
                              .:|.::| |||..:                                 
  Rat   432 ------------------VQVAVERGKSLKVR--------------------------------- 445

  Fly   777 RKSKHARKQHDNQDNQIEEAEKTGQEPPKSPTISKQNENLRDEENVIENAANDTSSASPVSASVV 841
                                             |:|:.|:|           ...:.||.|.   
  Rat   446 ---------------------------------SRQSSNIR-----------QVKAQSPDSC--- 463

  Fly   842 SVVELVRRRQGVTITKIPREQQQTAEDTAAVPIPLPTAPPPKQNIPKGNEAANPKQSDVERQQEQ 906
                    |.|:.:     :|..:|:                                       
  Rat   464 --------RCGLLL-----DQHASAQ--------------------------------------- 476

  Fly   907 LIKKVIPFIEIKTEVMSEPDDEGIEEASPANQPQTDQVPLQQETITAQPESQMPAAAPAPQPKPV 971
                                                                    :|:|:|:| 
  Rat   477 --------------------------------------------------------SPSPEPEP- 484

  Fly   972 DNAPFEEVRIKEEILSEDEMETEQSIVSRRLKSVPPMPLPMPPPPPLPPREESPATADSVRFVGD 1036
                                |||....|   :.:|.||.|                         
  Rat   485 --------------------ETEAVSSS---QEIPTMPQP------------------------- 501

  Fly  1037 TTIQRVSQKQGGKSTDTGGKRKGVQQVPIAGIPQAPSPTHSPLLSTAPSPSASPKPTSTLAVSKP 1101
              |:|||                                                          
  Rat   502 --IERVS---------------------------------------------------------- 506

  Fly  1102 PPPPPPKGKSASHLQFRGKNDRIPTSPPATAPPATNTSSLLRSNMVVIPVEQGGSCNAHSPMTIP 1166
                                            .:|.|..|                :|.||..:.
  Rat   507 --------------------------------VSTQTKKL----------------SASSPRMLH 523

  Fly  1167 VPPLRAVSKNTLQNTSTGSTSSCVPSSVSMPPPLAGLSIPPVATPTSQEESITNSGQPVGLLASA 1231
                        ::|.|.|...|                                          
  Rat   524 ------------RSTQTASDGVC------------------------------------------ 534

  Fly  1232 LNGTANDVLSSDSIPNDPITPGLATALSEMLLHTGVPKLIARPRGALRSDGSQIYPSQAGPVSQK 1296
                                        :.:.|....|:....:..::||.              
  Rat   535 ----------------------------QSMCHDKYTKIFNDFKDRMKSDH-------------- 557

  Fly  1297 LKENAHKITDYFISVIEDTLSDMATGDQSVLQARIAGLSLENERLKQHYDRQINDLHRTSELMIS 1361
             |....::..   ..:|...|:|....:..:...:|.:..|.:|    ..:|:.:  :..|..:.
  Rat   558 -KRETERVVR---EALEKLRSEMEEEKRQAVNKAVANMQGEMDR----KCKQVKE--KCKEEFVE 612

  Fly  1362 EMRKTLEQEHKRVISELRQQNAIELMRAVEEAKRKQWCANCMREAQLYCCWNTSYCDYPCQQLHW 1426
            |::| |..:||::||               :.|:||||.||..||..:||||||||...|||.||
  Rat   613 EIKK-LAAQHKQLIS---------------QTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHW 661

  Fly  1427 PG-HSATC 1433
            .. |..||
  Rat   662 HAEHKRTC 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1815NP_651881.2 PHD_PRKCBP1 345..386 CDD:277013 15/42 (36%)
Bromo_RACK7 403..501 CDD:99940 19/103 (18%)
BS69_related 520..603 CDD:99902 30/83 (36%)
zf-MYND 1399..1433 CDD:280009 19/34 (56%)
Med3 <1428..1664 CDD:288447 3/7 (43%)
Zmynd11XP_006254212.1 PHD_BS69 117..160 CDD:277012 15/42 (36%)
Bromo_ZMYND11 173..273 CDD:99924 22/113 (19%)
BS69_related 287..368 CDD:99902 38/109 (35%)
zf-MYND 634..669 CDD:396356 19/34 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183667at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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