DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and lrrn3

DIOPT Version :10

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001072526.1 Gene:lrrn3 / 779981 XenbaseID:XB-GENE-490955 Length:706 Species:Xenopus tropicalis


Alignment Length:529 Identity:106/529 - (20%)
Similarity:187/529 - (35%) Gaps:192/529 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LSCASNCTCK---WTNGKKSAI------CSSLQLTTIPNTLSTELQVLVL---------NDNHIP 82
            :.|..:|:|:   |...|...|      |::|.|.::|:.|..:.|:|:|         |.:|.|
 Frog    27 MDCPHSCSCEIRPWFTPKSIYIEALTVDCNALDLYSVPDKLPAKTQILLLQANNIEEIKNTDHFP 91

  Fly    83 ------------------------------YLNREEFSTL------GLLNLQRIYLKKSEVQYIH 111
                                          ||...:.:.|      ||.|||.:|:..:.:..|.
 Frog    92 VNLTGLDLSQNNLSLIANINFTNMHQILSVYLEENKLTELMEGSFSGLENLQELYINHNLISVIS 156

  Fly   112 KESFRNLKILVEIDLSDNKLEMLDK---------------------------------------- 136
            .::|..:..|:.:.|:.|:|:|::.                                        
 Frog   157 PKAFAGVSNLLRLHLNSNRLQMINSMWFEAIPNLEILMIGENPIVNIEDMNFKPLINLRSLVLAG 221

  Fly   137 --------DTFMGNDR------------------------LRILYLNGNPLKRLAAYQFPILPHL 169
                    :.|:|.|:                        |:.|.||.||::|:....|..:.||
 Frog   222 VNLTEIPDNAFLGLDKLESISFYDNKFIHVPSVALQKVVNLKFLDLNKNPVRRIQRGDFSNMLHL 286

  Fly   170 RTLDMH--------DCL------------------ISYIDPMSLANLNLLEFLNLKNNLLESLSE 208
            :.|.::        |.|                  ::||.|.:...|..||.|.|.:|.|.::..
 Frog   287 KELGINNMPELVSIDSLAIENLPELRKIEATNNPKLAYIHPNAFYRLPKLETLMLNSNSLSAIYR 351

  Fly   209 YVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSV------SLVCKGPPAQKDRTWDSVD 267
            ...:.:.|||.:|:..||.:|:|.:|     ::|...:|:      ||.|..||..:......|.
 Frog   352 STIEALPNLKEISIHSNPMRCDCVIR-----WINMNKTSIRFMEPDSLFCFDPPEFQGLNIRQVH 411

  Fly   268 --DELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVAW--ELNGKILDNDNVLFESES 328
              :.:..|.|.:...:.....:::.||:.:..|....:|.||:.|  ....|::.|         
 Frog   412 FREMMEICLPLIAPQSFPLDLDLNTGSSVSLHCRATAEPEPEIYWITPSGYKLVPN--------- 467

  Fly   329 IASDKLW----SNLTVFNVTSLDAGTYACTGSNSI------------GSMTQNISIYLSEIVQHV 377
            |||...:    ..||:.||:..:||.|.|...|.:            ||.|..::..|..|::.|
 Frog   468 IASGIFYVHPEGTLTIKNVSLAEAGLYTCVAKNLVGADLKTILITVDGSFTGEVNGSLKIIIKEV 532

  Fly   378 LEKTPETFW 386
            ...:....|
 Frog   533 QSNSVMVSW 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 LRR <56..>226 CDD:443914 56/312 (18%)
leucine-rich repeat 71..96 CDD:275380 11/69 (16%)
LRR_8 96..155 CDD:404697 19/130 (15%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 7/70 (10%)
leucine-rich repeat 145..168 CDD:275380 8/22 (36%)
leucine-rich repeat 169..216 CDD:275380 14/72 (19%)
LRRCT 225..274 CDD:214507 13/56 (23%)
Ig 286..360 CDD:472250 21/91 (23%)
Ig strand B 294..298 CDD:409353 0/3 (0%)
Ig strand C 307..310 CDD:409353 1/2 (50%)
Ig strand E 336..340 CDD:409353 1/3 (33%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
lrrn3NP_001072526.1 LRRNT 28..72 CDD:214470 11/43 (26%)
leucine-rich repeat 52..70 CDD:275380 5/17 (29%)
leucine-rich repeat 71..93 CDD:275380 6/21 (29%)
LRR 73..>369 CDD:443914 51/295 (17%)
leucine-rich repeat 94..117 CDD:275380 0/22 (0%)
leucine-rich repeat 118..141 CDD:275380 5/22 (23%)
leucine-rich repeat 142..165 CDD:275380 5/22 (23%)
leucine-rich repeat 166..189 CDD:275380 5/22 (23%)
leucine-rich repeat 190..213 CDD:275380 0/22 (0%)
leucine-rich repeat 214..237 CDD:275380 2/22 (9%)
leucine-rich repeat 238..261 CDD:275380 0/22 (0%)
leucine-rich repeat 262..285 CDD:275380 8/22 (36%)
leucine-rich repeat 286..310 CDD:275380 4/23 (17%)
leucine-rich repeat 311..333 CDD:275380 3/21 (14%)
leucine-rich repeat 336..359 CDD:275378 6/22 (27%)
PCC 341..>407 CDD:188093 19/70 (27%)
leucine-rich repeat 360..372 CDD:275378 5/11 (45%)
Ig_3 426..500 CDD:464046 20/82 (24%)

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