DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and LINGO3

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001094861.1 Gene:LINGO3 / 645191 HGNCID:21206 Length:592 Species:Homo sapiens


Alignment Length:502 Identity:108/502 - (21%)
Similarity:167/502 - (33%) Gaps:171/502 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CWIL---LCLVAWTVADDWSLSCASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNH 80
            ||:.   |.|:....|...:..|.:.|.|  |...::..|:..:||.:|:.:..|.::|.|:.|.
Human     3 CWLCVLSLPLLLLPAAPPPAGGCPARCEC--TVQTRAVACTRRRLTAVPDGIPAETRLLELSRNR 65

  Fly    81 IPYLNREEFSTLGLL-------------------NLQR---IYLKKSEVQYIHKESFRNLKILVE 123
            |..||..:.:.|..|                   ||.|   :.|:.::::.|....|..|..|..
Human    66 IRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTL 130

  Fly   124 IDLSDNKLEMLDKDTF------------------------------------------------- 139
            :|||:|||.:|...||                                                 
Human   131 LDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLG 195

  Fly   140 ----MGNDRLR------------------------------------------------------ 146
                :|..|||                                                      
Human   196 HLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITA 260

  Fly   147 -------------ILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNL 198
                         .|.|:.||:..:....|..|..||.|.:...|::.::|.:...|..:..|||
Human   261 VPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNL 325

  Fly   199 KNNLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSL-----VCKGPPAQ 258
            .||||.:|.|..|..:..|:||.::.||..|:|:|.    |.|..| .:::.     .|..|...
Human   326 SNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLL----WIVQRR-KTLNFDGRLPACATPAEV 385

  Fly   259 KDRTW----DSVDDELFGC-PPRVEIFNNEEVQNI--DIGSNTTFSCLVYGDPLPEVAWELNGKI 316
            :....    |||..|.|.| .|::   ....:|.:  ..|.:..|.|...|:|.|.|||...   
Human   386 RGDALRNLPDSVLFEYFVCRKPKI---RERRLQRVTATAGEDVRFLCRAEGEPAPTVAWVTP--- 444

  Fly   317 LDNDNVLFESESIASDKLWSNLTVFNVTSLDAGTYACTGSNSIGSMT 363
             .:..|...|...|.......|.:.:....|:|||.|..||:.|:.|
Human   445 -QHRPVTATSAGRARVLPGGTLEIQDARPQDSGTYTCVASNAGGNDT 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 8/43 (19%)
LRR_8 96..155 CDD:290566 24/181 (13%)
leucine-rich repeat 97..120 CDD:275380 6/25 (24%)
leucine-rich repeat 121..144 CDD:275380 11/75 (15%)
LRR_4 144..186 CDD:289563 14/108 (13%)
leucine-rich repeat 145..168 CDD:275380 8/89 (9%)
leucine-rich repeat 169..216 CDD:275380 16/46 (35%)
LRRCT 225..274 CDD:214507 16/58 (28%)
Ig 295..367 CDD:143165 21/69 (30%)
LINGO3NP_001094861.1 LRRNT 24..58 CDD:214470 9/35 (26%)
LRR 1 55..76 7/20 (35%)
LRR_8 57..138 CDD:290566 20/80 (25%)
LRR_4 59..95 CDD:289563 8/35 (23%)
leucine-rich repeat 59..79 CDD:275380 7/19 (37%)
LRR 2 79..100 1/20 (5%)
leucine-rich repeat 80..103 CDD:275380 3/22 (14%)
LRR 3 103..124 4/20 (20%)
leucine-rich repeat 104..127 CDD:275380 4/22 (18%)
LRR_RI 111..>286 CDD:238064 21/174 (12%)
LRR_8 127..>172 CDD:290566 10/44 (23%)
LRR 4 127..148 10/20 (50%)
leucine-rich repeat 128..151 CDD:275380 10/22 (45%)
LRR 5 151..172 0/20 (0%)
leucine-rich repeat 152..199 CDD:275380 0/46 (0%)
LRR 6 175..196 0/20 (0%)
LRR_8 198..258 CDD:290566 4/59 (7%)
leucine-rich repeat 200..223 CDD:275380 4/22 (18%)
LRR 7 207..228 0/20 (0%)
leucine-rich repeat 224..247 CDD:275380 0/22 (0%)
LRR_8 247..303 CDD:290566 9/55 (16%)
LRR 8 247..268 0/20 (0%)
leucine-rich repeat 248..271 CDD:275380 0/22 (0%)
LRR 9 271..292 5/20 (25%)
leucine-rich repeat 272..293 CDD:275380 5/20 (25%)
LRR 10 295..316 5/20 (25%)
leucine-rich repeat 296..319 CDD:275380 6/22 (27%)
LRR 11 319..340 10/20 (50%)
leucine-rich repeat 322..343 CDD:275380 10/20 (50%)
I-set 407..497 CDD:254352 24/91 (26%)
Ig 422..490 CDD:299845 21/71 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41933
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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