DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek6 and lrit3a

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:400 Identity:95/400 - (23%)
Similarity:163/400 - (40%) Gaps:95/400 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LVAWTVADDWSLS---CASNCTCKW-----TNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNHI 81
            |||..:...||::   |.|.|||.:     ..|.:|.:|:...::.||              .::
Zfish     5 LVAQVLLGCWSVAQPFCPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIP--------------VNV 55

  Fly    82 PYLNREEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLR 146
            |            |:..::.::|:.|:.:..|:|..|..|..:.::.|.:..:|..:|.....|.
Zfish    56 P------------LDTVKLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDPGSFYNLKVLH 108

  Fly   147 ILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESL-SEYV 210
            .|.|:||.:..........:|.|:|||:|:..::.:...:...|..:.:|::.:|.|.:| |:.|
Zfish   109 ELRLDGNMIATFPWESLKEMPSLKTLDLHNNRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLV 173

  Fly   211 --------FQHMANL--KT-LSLEENPWQCNCKLRKFRGWYVNSRLSSVSLV-------CKGPPA 257
                    .|..||.  || |.|::|||.|:|::.|.   ...|:::.:.:|       |.||  
Zfish   174 DIWPPFSGIQPSANTSQKTVLGLQDNPWYCDCRISKL---IELSKMAGIPVVLMDQVLTCSGP-- 233

  Fly   258 QKDRTWDSVDDELFGCPPRVEIFNNEEVQNI--------------DIGSNTTFSCLVYGDPLPEV 308
                      :.|.|.     :|...|:...              .:|||....|...|.|.|.:
Zfish   234 ----------EHLSGV-----LFQRAELDQCVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTL 283

  Fly   309 AW-ELNGKILDNDNVLFESESIASDKLWSNLTVFNVTSLDAGTYACTGSNSIGSMTQNISIYLSE 372
            .| ..:|.:::|..|   .||......||.|::.::...|||.|.|...|..|    |...|::.
Zfish   284 LWTTADGSVVNNTVV---QESPGEGVRWSILSLHSIVFKDAGDYRCKAKNVAG----NAEAYITL 341

  Fly   373 IVQHVLEKTP 382
            .|..|...||
Zfish   342 SVDGVQPTTP 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 1/24 (4%)
LRR_8 96..155 CDD:290566 14/58 (24%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 4/22 (18%)
LRR_4 144..186 CDD:289563 11/41 (27%)
leucine-rich repeat 145..168 CDD:275380 5/22 (23%)
leucine-rich repeat 169..216 CDD:275380 13/55 (24%)
LRRCT 225..274 CDD:214507 13/55 (24%)
Ig 295..367 CDD:143165 21/72 (29%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 15/59 (25%)
leucine-rich repeat 83..106 CDD:275378 4/22 (18%)
LRR_4 107..145 CDD:289563 11/37 (30%)
leucine-rich repeat 107..130 CDD:275378 5/22 (23%)
LRR_8 129..>171 CDD:290566 11/41 (27%)
LRR_4 129..170 CDD:289563 11/40 (28%)
leucine-rich repeat 131..154 CDD:275378 6/22 (27%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
TPKR_C2 199..249 CDD:301599 15/69 (22%)
Ig 252..343 CDD:299845 25/97 (26%)
IG_like 261..343 CDD:214653 25/88 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6815
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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