DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and RTN4RL2

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_848665.1 Gene:RTN4RL2 / 349667 HGNCID:23053 Length:420 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380
LRR_8 96..155 CDD:290566
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..144 CDD:275380
LRR_4 144..186 CDD:289563
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..216 CDD:275380
LRRCT 225..274 CDD:214507
Ig 295..367 CDD:143165
RTN4RL2NP_848665.1 LRR_8 60..117 CDD:290566
leucine-rich repeat 62..83 CDD:275380
leucine-rich repeat 84..107 CDD:275380
LRR_RI 103..>261 CDD:238064
LRR_8 108..167 CDD:290566
leucine-rich repeat 108..132 CDD:275380
leucine-rich repeat 133..156 CDD:275380
LRR_8 156..215 CDD:290566
leucine-rich repeat 157..180 CDD:275380
leucine-rich repeat 181..204 CDD:275380
LRR_8 204..262 CDD:290566
leucine-rich repeat 205..228 CDD:275380
leucine-rich repeat 229..252 CDD:275380
TPKR_C2 261..311 CDD:301599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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