DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and Slitrk2

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001101057.1 Gene:Slitrk2 / 309349 RGDID:1561361 Length:846 Species:Rattus norvegicus


Alignment Length:221 Identity:63/221 - (28%)
Similarity:106/221 - (47%) Gaps:6/221 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQV--LVLNDNHIPYLNREEFSTLGLLNLQRI 100
            |...|.|:......:..|.:...||:......:.::  |.||.|.:..|...||  :...|...:
  Rat    29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYSNAVTL 91

  Fly   101 YLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYLNGNPLKRLAAYQFPI 165
            :|..:.:|.|...:|..||.|..:.|::||||:|.:|||:|.:.|..|..:.|.:..:.|..|..
  Rat    92 HLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSK 156

  Fly   166 LPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESLS-EYVFQHMANLKTLSLEENPWQC 229
            |..|:.|.::|.|:..: |.::....||..|:|:.|.|:.:. ..|.:|:..:..:.||||||.|
  Rat   157 LNKLKVLILNDNLLLSL-PSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNC 220

  Fly   230 NCKLRKFRGWYVNSRLSSVSLVCKGP 255
            .|.|...:.|.....:....:||:.|
  Rat   221 TCDLLPLKAWLDTITVFVGEIVCETP 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 7/26 (27%)
LRR_8 96..155 CDD:290566 21/58 (36%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 11/22 (50%)
LRR_4 144..186 CDD:289563 11/41 (27%)
leucine-rich repeat 145..168 CDD:275380 6/22 (27%)
leucine-rich repeat 169..216 CDD:275380 13/47 (28%)
LRRCT 225..274 CDD:214507 10/31 (32%)
Ig 295..367 CDD:143165
Slitrk2NP_001101057.1 leucine-rich repeat 67..87 CDD:275378 7/21 (33%)
LRR_8 86..146 CDD:404697 21/59 (36%)
leucine-rich repeat 90..111 CDD:275380 5/20 (25%)
leucine-rich repeat 112..135 CDD:275380 11/22 (50%)
LRR_8 135..193 CDD:404697 16/58 (28%)
leucine-rich repeat 136..159 CDD:275380 6/22 (27%)
leucine-rich repeat 160..182 CDD:275380 5/22 (23%)
leucine-rich repeat 183..207 CDD:275380 7/23 (30%)
leucine-rich repeat 208..370 CDD:275380 13/39 (33%)
TPKR_C2 216..>252 CDD:417692 10/31 (32%)
PPP1R42 358..531 CDD:411060
leucine-rich repeat 371..401 CDD:275380
LRR_8 400..460 CDD:404697
leucine-rich repeat 402..425 CDD:275380
leucine-rich repeat 426..449 CDD:275380
leucine-rich repeat 450..469 CDD:275380
leucine-rich repeat 474..492 CDD:275380
leucine-rich repeat 497..510 CDD:275378
leucine-rich repeat 522..534 CDD:275378
LRRCT 530..580 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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