DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and Slitrk6

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001099527.1 Gene:Slitrk6 / 290467 RGDID:1306550 Length:840 Species:Rattus norvegicus


Alignment Length:429 Identity:101/429 - (23%)
Similarity:177/429 - (41%) Gaps:70/429 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SCASNCTCKWTNGKKSAIC-----SSLQLTTIPNTLSTELQVLVLNDNHIPYLNREEFSTLGLLN 96
            ||.:.|||:..:|.....|     ::|...::|.:....|.:|   :|.:..|:..:||  ||.|
  Rat    30 SCDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLL---NNGLTTLHTNDFS--GLTN 89

  Fly    97 LQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYLNGNPLKRLAAY 161
            ...|:|..:.:..|...:|..|.:|.::.::.|.||:|.:|||.|.:.|..|..:.|.:..:...
  Rat    90 ALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQS 154

  Fly   162 QFPILPHLRTLDMHDCLISYIDPMSLANLNLLEF-----LNLKNNLLESLSEYV--FQHMANLKT 219
            .|..|..|:.|.::|..|..:.|      |:..|     |:|:.|.|::| .||  .:|:..:..
  Rat   155 AFSKLNRLKVLILNDNAIESLPP------NIFRFVPLTHLDLRGNQLQTL-PYVGFLEHIGRILD 212

  Fly   220 LSLEENPWQCNCKLRKFRGWYVNSRLSSV--SLVCKGPPAQKDRTWDSVDDE-LFGCPPRVEIFN 281
            |.||:|.|.|||:|.:.:.|..|....|:  .::|..||..|......:..| :...||..|...
  Rat   213 LQLEDNKWACNCELLQLKNWLENMPPQSIIGDVICYSPPLFKGSILSRLKKESICPTPPVYEEHE 277

  Fly   282 NEEVQNIDIGSNTTFSCLVYGD------------------------PLPEVAWELNGKILDNDNV 322
            :.....:.|.|:|:.|.|...:                        |:|......|.|:|....:
  Rat   278 DPAGSLLAITSSTSDSRLSSKNTSILKQPTKAPGSVPYLTKPSTQLPVPYCPVPCNCKVLSPSGL 342

  Fly   323 LFES-----ESIASDK----------LWSNL--TVFNVTSLDAGTYAC--TGSNSIGSMTQNISI 368
            |...     ||::..:          |..|:  |:.....:|..|...  .|:|.|..:.:...:
  Rat   343 LIHCQERNIESVSDLQPPPHNPRKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFM 407

  Fly   369 YLSEIVQHVLEKTPETFWYFGLIMGIFGTVFLLISISFV 407
            .|:.:.:..|.....|..|.|:.:|:....:|.:..:.|
  Rat   408 NLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAV 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 8/24 (33%)
LRR_8 96..155 CDD:290566 18/58 (31%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 9/22 (41%)
LRR_4 144..186 CDD:289563 10/41 (24%)
leucine-rich repeat 145..168 CDD:275380 5/22 (23%)
leucine-rich repeat 169..216 CDD:275380 15/53 (28%)
LRRCT 225..274 CDD:214507 14/51 (27%)
Ig 295..367 CDD:143165 18/114 (16%)
Slitrk6NP_001099527.1 leucine-rich repeat 68..89 CDD:275380 8/25 (32%)
LRR_8 69..124 CDD:290566 16/59 (27%)
leucine-rich repeat 94..113 CDD:275380 4/18 (22%)
leucine-rich repeat 114..137 CDD:275380 9/22 (41%)
LRR_8 137..195 CDD:290566 15/63 (24%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..177 CDD:275380 4/14 (29%)
leucine-rich repeat 185..260 CDD:275380 24/75 (32%)
leucine-rich repeat 210..222 CDD:275378 5/11 (45%)
TPKR_C2 218..268 CDD:301599 14/49 (29%)
leucine-rich repeat 261..411 CDD:275380 26/149 (17%)
leucine-rich repeat 365..387 CDD:275380 4/21 (19%)
LRR_8 387..444 CDD:290566 11/56 (20%)
LRR_4 388..425 CDD:289563 6/36 (17%)
LRR_4 410..449 CDD:289563 7/37 (19%)
leucine-rich repeat 412..435 CDD:275380 5/22 (23%)
LRR_8 434..493 CDD:290566 2/13 (15%)
leucine-rich repeat 436..459 CDD:275380 2/11 (18%)
leucine-rich repeat 460..481 CDD:275380
LRRCT 516..566 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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