DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek6 and Lrrc52

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001070902.1 Gene:Lrrc52 / 289199 RGDID:1312014 Length:314 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380
LRR_8 96..155 CDD:290566
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..144 CDD:275380
LRR_4 144..186 CDD:289563
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..216 CDD:275380
LRRCT 225..274 CDD:214507
Ig 295..367 CDD:143165
Lrrc52NP_001070902.1 LRRNT 26..55 CDD:214470
leucine-rich repeat 35..54 CDD:275380
LRR_4 56..92 CDD:289563
leucine-rich repeat 56..78 CDD:275380
LRR_8 79..136 CDD:290566
leucine-rich repeat 79..102 CDD:275380
LRR_4 102..>136 CDD:289563
leucine-rich repeat 103..126 CDD:275380
LRR_8 125..185 CDD:290566
leucine-rich repeat 127..151 CDD:275380
leucine-rich repeat 152..175 CDD:275380
TPKR_C2 184..>222 CDD:301599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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