DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek6 and LRFN5

DIOPT Version :9

Sequence 1:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001333102.1 Gene:LRFN5 / 145581 HGNCID:20360 Length:719 Species:Homo sapiens


Alignment Length:382 Identity:89/382 - (23%)
Similarity:158/382 - (41%) Gaps:55/382 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNHIPYLNREEFSTLGLLNLQRIYL 102
            |...|.|:..:...:.:|:...|..:|..:......|.|.||.:..:.|::|:  .:.:|..:.|
Human    20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFA--NMTSLVDLTL 82

  Fly   103 KKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYLNGNPLKRLAAYQFPILP 167
            .::.:.:|...:|.:|:.|..:.|:.|:|..:..|.|.|...|..|.||.|.|..:::..|..:.
Human    83 SRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVF 147

  Fly   168 HLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLLESLSEYVFQHMANLK-------------- 218
            .|..||:....:..|...::..:..|..|:|.:|:::::.:..|.|:..:.              
Human   148 ALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPP 212

  Fly   219 ---------------------TLSLEENPWQCNCKLRKFRGWYVNSRLSSVS--LVCKGPPAQKD 260
                                 .||...||..|||:|...|      |||...  ..|..||....
Human   213 DPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLR------RLSREDDLETCASPPLLTG 271

  Fly   261 RTWDSVDDELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVAW-ELNGKILDNDNVLF 324
            |.:.|:.:|.|.|.|.:...:..|::.:: |...|..|...|||.|.:.| ...||::.|     
Human   272 RYFWSIPEEEFLCEPPLITRHTHEMRVLE-GQRATLRCKARGDPEPAIHWISPEGKLISN----- 330

  Fly   325 ESESIASDKLWSNLTVFNVTSLDAGTYACTGSNSIGSMTQNISIYLSEIVQHVLEKT 381
            .:.|:..|.  ..|.:...|..|.|.:.|..||..|..||.:.:::.:: .|:|..|
Human   331 ATRSLVYDN--GTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKL-PHLLNST 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek6NP_001263151.1 leucine-rich repeat 71..96 CDD:275380 6/24 (25%)
LRR_8 96..155 CDD:290566 17/58 (29%)
leucine-rich repeat 97..120 CDD:275380 5/22 (23%)
leucine-rich repeat 121..144 CDD:275380 7/22 (32%)
LRR_4 144..186 CDD:289563 11/41 (27%)
leucine-rich repeat 145..168 CDD:275380 7/22 (32%)
leucine-rich repeat 169..216 CDD:275380 10/46 (22%)
LRRCT 225..274 CDD:214507 17/50 (34%)
Ig 295..367 CDD:143165 22/72 (31%)
LRFN5NP_001333102.1 LRR 1 52..73 6/22 (27%)
LRR 2 76..97 4/20 (20%)
LRR 3 100..121 6/20 (30%)
LRR 4 124..145 7/20 (35%)
LRR 5 148..169 4/20 (20%)
LRR 6 172..193 5/20 (25%)
LRR 7 196..217 0/20 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..414 89/382 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 615..694
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I4688
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.