DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and NTT

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_191326.1 Gene:NTT / 824936 AraportID:AT3G57670 Length:383 Species:Arabidopsis thaliana


Alignment Length:188 Identity:44/188 - (23%)
Similarity:69/188 - (36%) Gaps:39/188 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 CEQCGRHFTCPSNFKLHLLRH----------------TGVKSFACDQCSQQFYTATLLRRHQELH 246
            |..|.:.|...:|.::|:..|                ||:....|..|      |...|.:.:..
plant   219 CPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCC------APGCRNNIDHP 277

  Fly   247 AGNALFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHC 311
            ....|...|..:..|....|           :|||.|::|.|:||:.|..|||. .:.| :.::|
plant   278 RAKPLKDFRTLQTHYKRKHG-----------IKPFMCRKCGKAFAVRGDWRTHE-KNCG-KLWYC 329

  Fly   312 DSCQVSFVRRSHLTSHYRSKGHAHTSSAQAALDNPVELDVKASNGMQTGAKDEALLGK 369
             .|...|..:..|..|.::.|:.|   ....:|...|.|..||...|.....|::..|
plant   330 -ICGSDFKHKRSLKDHIKAFGNGH---GAYGIDGFDEEDEPASEVEQLDNDHESMQSK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..243 CDD:275368 4/16 (25%)
C2H2 Zn finger 254..275 CDD:275368 3/20 (15%)
zf-C2H2 281..303 CDD:278523 10/21 (48%)
C2H2 Zn finger 283..303 CDD:275368 9/19 (47%)
zf-H2C2_2 296..320 CDD:290200 7/23 (30%)
C2H2 Zn finger 311..329 CDD:275368 5/17 (29%)
NTTNP_191326.1 C2H2 Zn finger 323..346 CDD:275368 6/24 (25%)
C2H2 Zn finger 303..319 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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