DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and CG4854

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:356 Identity:95/356 - (26%)
Similarity:150/356 - (42%) Gaps:69/356 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGLFIFCSTPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAIAFRER 70
            ||.|  .:.....|.:..||:  ...:|:..||:.|...|  :.|..||:.|.|.|:.|:..|..
  Fly    12 CRIC--LVQPKDESLMPTEPD--FPDKIKRCTGVELSESP--DWPNRICTSCALLLRAALKLRSL 70

  Fly    71 VIRTQKTLQE-----------------SPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPE 118
            ..:|:|.|:|                 .....:.:|.::.|.|.:.|::|       |.:|  ..
  Fly    71 CQQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEY-------EYLD--SY 126

  Fly   119 EHLLEETEEPYEICEQNE----QPQVKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRL 179
            :..||.:|:  ..|..:|    :|.:..| :|.....|.|  |..|..   .|:.||.       
  Fly   127 DVTLESSED--VACSADELVSIEPAISAP-EESVYSLSPK--PVTFED---EDSGQAA------- 176

  Fly   180 TEDEVVALKRERRKRDCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQE 244
                           ...|..|...::.......|:..|:..|...|:.|.::|.....|.||..
  Fly   177 ---------------SFTCNICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMN 226

  Fly   245 LHAGNALFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAF 309
            .|.||..::|.||::.:::.|.||:|:|: |||.:|:.|:.|::||..|..||.|:.:|||.|.|
  Fly   227 THTGNRPYKCDYCDSRFADPSTRIKHQRI-HTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPF 290

  Fly   310 HCDSCQVSFVRRSHLTSHYRSKGHAHTSSAQ 340
            .|..||.||.:..|..||  .|.|..|...:
  Fly   291 SCQYCQKSFSQLHHKNSH--EKSHKRTKEVK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 22/73 (30%)
C2H2 Zn finger 198..218 CDD:275368 3/19 (16%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 8/20 (40%)
zf-C2H2 281..303 CDD:278523 8/21 (38%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
zf-H2C2_2 296..320 CDD:290200 13/23 (57%)
C2H2 Zn finger 311..329 CDD:275368 8/17 (47%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 14/50 (28%)
C2H2 Zn finger 180..200 CDD:275368 3/19 (16%)
zf-H2C2_2 193..217 CDD:290200 6/23 (26%)
COG5048 201..>258 CDD:227381 19/57 (33%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
zf-H2C2_2 221..244 CDD:290200 9/22 (41%)
C2H2 Zn finger 236..256 CDD:275368 8/20 (40%)
zf-H2C2_2 251..273 CDD:290200 10/22 (45%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 13/23 (57%)
C2H2 Zn finger 292..312 CDD:275368 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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