DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and CG17806

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:428 Identity:124/428 - (28%)
Similarity:178/428 - (41%) Gaps:95/428 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGLFIFCSTPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAIAFRER 70
            |||||.  ......:||::....:|..|..|||.:|...||  :|..||..|.|||..|||||||
  Fly     5 CRTCGQ--EAEHAKSLFDKEARDVLSNILKLTGFWLRNQPG--VPTRICLSCLLDLNDAIAFRER 65

  Fly    71 VIRTQ---------------KTLQESPNLGNAELIESFAVGV------------EKEIQ------ 102
            .|||.               :|.:|..|......::...:.:            .|::.      
  Fly    66 CIRTNSSWFEKQGKQEDSDTETAREGGNNRLESRVDVMPISIAQPQRRRILPQRSKKVDGVPLKT 130

  Fly   103 -----YAEEVTEI---EVIDLLPEEHLLEETEEP-----YEICEQN------EQPQV-------- 140
                 |...|.||   :::|.|..|..::...||     |.:...|      |.|||        
  Fly   131 VETPIYPLVVPEIPPADLVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTL 195

  Fly   141 KVPAQEKKLRRSTKTTPTV---------------FTSVKFADNSQATRTQWSRLTEDEVVALKR- 189
            :|..:.:|.||..::...:               .|:.|..:...|||.:|.        |.|| 
  Fly   196 QVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWG--------AAKRA 252

  Fly   190 -ERRKRDCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQEL-HAGNALF 252
             ....|...|:|||:.|:...||.:||.||.|.|.|.|.:|.:..:|..||..|..: |.|...:
  Fly   253 YALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPY 317

  Fly   253 QCRYCEATYSNASGRIQHERMRHTNV--KPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQ 315
            .|:||...:.|...|:.|||....:.  :|..|..|.|:|..|..|:.|::.|||.:.|||:.||
  Fly   318 VCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQ 382

  Fly   316 VSFVRRSHLTSHYRSKGH---AHTSSAQAALDNPVELD 350
            ..|.||:.|.:||:||.|   ....|....:|..|:.|
  Fly   383 TFFNRRNALATHYKSKHHRLKVEEQSKMPKMDATVQAD 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 33/88 (38%)
C2H2 Zn finger 198..218 CDD:275368 9/19 (47%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 8/20 (40%)
zf-C2H2 281..303 CDD:278523 7/21 (33%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 296..320 CDD:290200 11/23 (48%)
C2H2 Zn finger 311..329 CDD:275368 8/17 (47%)
CG17806NP_650658.1 zf-AD 4..76 CDD:285071 32/74 (43%)
zf-C2H2 260..282 CDD:278523 9/21 (43%)
C2H2 Zn finger 262..282 CDD:275368 9/19 (47%)
C2H2 Zn finger 290..311 CDD:275368 6/20 (30%)
COG5048 <298..>383 CDD:227381 29/84 (35%)
C2H2 Zn finger 319..339 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
ZnF_U1 375..407 CDD:197732 14/31 (45%)
C2H2 Zn finger 378..396 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_120097
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.860

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