DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and CG6654

DIOPT Version :10

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:200 Identity:56/200 - (28%)
Similarity:86/200 - (43%) Gaps:19/200 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 CEQNEQ-PQVKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRKRD 195
            |:..|. .:..|...::.||........|||.:       :|.....|:...|          :.
  Fly   392 CDSKEALSKHMVQGHKRNLRNQCNICQKVFTML-------STLRDHMRIHTGE----------KP 439

  Fly   196 CICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQELHAGNALFQCRYCEAT 260
            .:|..||:.||..:|.:.|.|||:..|||.|:.|...|.|...|..|...|.|:..|:|..|.|.
  Fly   440 FVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLAR 504

  Fly   261 YSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLT 325
            ::.:....:|:| :||..:|:.|..|...|.....|:.|..:|||.|.:.|..|..:|.:|....
  Fly   505 FTTSCSLAKHKR-KHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQ 568

  Fly   326 SHYRS 330
            .|.|:
  Fly   569 MHQRT 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
SUF4-like 254..>301 CDD:411020 13/46 (28%)
C2H2 Zn finger 254..275 CDD:411020 5/20 (25%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
C2H2 Zn finger 283..303 CDD:275368 5/19 (26%)
C2H2 Zn finger 283..301 CDD:411020 5/17 (29%)
zf-H2C2_2 296..320 CDD:463886 9/23 (39%)
zf-met 309..333 CDD:463736 6/21 (29%)
C2H2 Zn finger 311..329 CDD:275368 5/17 (29%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 54/195 (28%)
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 385..406 CDD:275370 3/13 (23%)
C2H2 Zn finger 414..434 CDD:275368 5/26 (19%)
C2H2 Zn finger 442..490 CDD:275368 19/47 (40%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
C2H2 Zn finger 498..518 CDD:275368 5/20 (25%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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