DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and CkIIalpha-i1

DIOPT Version :10

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster


Alignment Length:319 Identity:81/319 - (25%)
Similarity:114/319 - (35%) Gaps:87/319 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ICSPCELDLQTAIAFRERVIRTQKTLQESPNLGNA---------ELIESFAVGVEKEIQYAEEVT 108
            ||.||         |.| .:|..::|::   .|.|         |:.:|.|..::.|:...:|..
  Fly    52 ICEPC---------FGE-TLRISESLEK---WGTAQDEFHRRPIEIDDSTAFQIKLEVTSNKEEV 103

  Fly   109 EIEVIDLLPEE-----HLLEETEEPYEICEQNEQPQVKVPAQEKKLRRSTKTTPTVFTSVK---- 164
            |.|..|   ||     |:.|..:|  :..|:||..::.|       ..|.||....|.||.    
  Fly   104 ETEKND---EENSFDQHIAEPVKE--DPLEKNEHMEIVV-------EESLKTASVDFFSVGLSRD 156

  Fly   165 -------FADNSQATRTQWSRLTEDEVVALKRERRKRDCICEQCGRHFTCPSNFKLHLLRHTGVK 222
                   |.|.:||||                      .:|..||......::.::|..:.....
  Fly   157 GLAVTKFFKDKTQATR----------------------MLCTCCGHVLEILTHIRMHSCKPRPNP 199

  Fly   223 SFACDQCSQQFYTATLLRRHQELHAGNAL--------FQCRYCEATYSNASGRIQHERMRHTNVK 279
            .:.|..|..:|:....|..|.:....|..        |.|..|...:......|:||...| ||.
  Fly   200 VYYCRDCGSEFHKLHELHEHMKTMKHNKTMCGAKDLEFLCLRCNQIFPRYFDVIRHENSVH-NVS 263

  Fly   280 PFTCKECNKSFAMSGKLRTHMLSH----TGVRAFHC--DSCQVSFVRRSHLTSHYRSKG 332
            .|.|.|||.|||..|..|.|..||    |..|.:.|  ..|..|:...:.|.||..|.|
  Fly   264 DFICVECNMSFANQGSYRRHTRSHKVKFTQQRFYECPYKDCTSSYRVWARLMSHMSSHG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 8/26 (31%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
C2H2 Zn finger 226..243 CDD:275368 4/16 (25%)
SUF4-like 254..>301 CDD:411020 19/46 (41%)
C2H2 Zn finger 254..275 CDD:411020 5/20 (25%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
C2H2 Zn finger 283..303 CDD:275368 10/19 (53%)
C2H2 Zn finger 283..301 CDD:411020 10/17 (59%)
zf-H2C2_2 296..320 CDD:463886 9/29 (31%)
zf-met 309..333 CDD:463736 8/26 (31%)
C2H2 Zn finger 311..329 CDD:275368 6/19 (32%)
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..287 CDD:275368 10/19 (53%)
C2H2 Zn finger 299..321 CDD:275368 6/21 (29%)

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