DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1792 and D19A

DIOPT Version :9

Sequence 1:	NP_651878.1	Gene:	CG1792 / 43727	FlyBaseID:	FBgn0039860	Length:	372	Species:	Drosophila melanogaster
Sequence 2:	NP_477304.1	Gene:	D19A / 38718	FlyBaseID:	FBgn0022935	Length:	845	Species:	Drosophila melanogaster

Alignment Length:	166	Identity:	48/166 - (28%)
Similarity:	69/166 - (41%)	Gaps:	29/166 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   194 RDCICEQCGRHFTCPSNFKLHLLRHTGVK-SFACDQCSQQFYTATLLRRHQELHAG--------- 248
            ||..|.:|...|.||:..|.|:.:|||.: .:.|:.|.::|...:.||.|...|||
  Fly   373 RDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYC 437

  Fly   249 ----------NA---------LFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSG 294
                      ||         .|:||.|:....|......|.::.|...|.|.|:.|.|:|..|.
  Fly   438 GVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSH 502

  Fly   295 KLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRS 330
            ..:.|..||||.:...|..|...|:....||.|.::
  Fly   503 ACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKT 538

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1792	NP_651878.1	zf-AD	6..80	CDD:214871
		C2H2 Zn finger	198..218	CDD:275368	7/19 (37%)
		C2H2 Zn finger	226..243	CDD:275368	5/16 (31%)
		C2H2 Zn finger	254..275	CDD:275368	5/20 (25%)
		zf-C2H2	281..303	CDD:278523	7/21 (33%)
		C2H2 Zn finger	283..303	CDD:275368	6/19 (32%)
		zf-H2C2_2	296..320	CDD:290200	8/23 (35%)
		C2H2 Zn finger	311..329	CDD:275368	6/17 (35%)
D19A	NP_477304.1	zf-AD	12..83	CDD:214871
		C2H2 Zn finger	343..362	CDD:275368
		C2H2 Zn finger	377..397	CDD:275368	7/19 (37%)
		zf-H2C2_2	389..414	CDD:290200	7/24 (29%)
		C2H2 Zn finger	406..426	CDD:275368	6/19 (32%)
		C2H2 Zn finger	434..454	CDD:275368	2/19 (11%)
		C2H2 Zn finger	462..483	CDD:275368	5/20 (25%)
		C2H2 Zn finger	491..511	CDD:275368	6/19 (32%)
		C2H2 Zn finger	519..539	CDD:275368	6/20 (30%)
		C2H2 Zn finger	652..673	CDD:275368
		C2H2 Zn finger	681..701	CDD:275368
		zf-H2C2_2	694..718	CDD:290200
		C2H2 Zn finger	709..729	CDD:275368
		tolA_full	724..>814	CDD:274303
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24388
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100