DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and cg

DIOPT Version :10

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:323 Identity:80/323 - (24%)
Similarity:127/323 - (39%) Gaps:87/323 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EEPNSVML--------HQIEVLTGL-----FLLGGPGNELPPFICSPCELDLQTAIAFRERVIRT 74
            ||.|.:::        ||...:|..     ...||     .|..||                :..
  Fly   179 EECNEILIKRAIAAGHHQTHTITAADGSHHHASGG-----TPSFCS----------------VGG 222

  Fly    75 QKTLQESPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEETEEPYEICEQNEQPQ 139
            ..||     ||  :::...:|.|:|.||.                  ||:.|:     .|.|.|.
  Fly   223 ATTL-----LG--DILPGISVQVQKVIQG------------------LEDNED-----SQGEAPN 257

  Fly   140 VKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRKRDCICEQCGRH 204
            :|:  :...|..|.||  .:..|:.|:: :.||              :|:|   |...|::||:.
  Fly   258 LKL--EPGTLELSPKT--ELQESMHFSE-TDAT--------------IKKE---RPYSCDECGKS 300

  Fly   205 FTCPSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQELHAGNALFQCRYCEATYSNASGRIQ 269
            |....:...|...|||.:...|..|.:.|.....|..|..||:....:||:.|:.:::.....:.
  Fly   301 FLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLT 365

  Fly   270 HERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKG 332
            |.|: |:..:||.|:||.::|.:...|.||...|.|.|.:.|:.|..||.:.:||..|.|..|
  Fly   366 HSRV-HSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHG 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 13/69 (19%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..243 CDD:275368 4/16 (25%)
SUF4-like 254..>301 CDD:411020 14/46 (30%)
C2H2 Zn finger 254..275 CDD:411020 4/20 (20%)
C2H2 Zn finger 254..275 CDD:275368 4/20 (20%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
C2H2 Zn finger 283..301 CDD:411020 7/17 (41%)
zf-H2C2_2 296..320 CDD:463886 10/23 (43%)
zf-met 309..333 CDD:463736 9/24 (38%)
C2H2 Zn finger 311..329 CDD:275368 7/17 (41%)
cgNP_001097306.2 COG5048 287..>371 CDD:227381 23/87 (26%)
C2H2 Zn finger 294..314 CDD:275368 5/19 (26%)
zf-H2C2_2 306..331 CDD:463886 7/24 (29%)
C2H2 Zn finger 322..342 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 4/20 (20%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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