DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and Zfp280d

DIOPT Version :10

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001101635.2 Gene:Zfp280d / 315798 RGDID:1560796 Length:969 Species:Rattus norvegicus


Alignment Length:210 Identity:52/210 - (24%)
Similarity:76/210 - (36%) Gaps:24/210 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 YEICEQNEQPQVKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRK 193
            ||...|.||              .|.||...|:.:|...|:...........|.|  ....|..:
  Rat   307 YEGDVQEEQ--------------KTHTTFKCFSCLKVLKNNIRFMNHMKHHLELE--KQSSESWE 355

  Fly   194 RDCICEQCGRHFTCPSNFKLHL-LRHTGVK-SFACDQCSQQFYTATLLRRH-QELH-AGNALFQC 254
            :...|:.|.|.|..|...:.|: ..||..: |..|..|...|.|..:|.:| ::.| .|...:.|
  Rat   356 KHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEQILLQHMKDNHKPGEMPYIC 420

  Fly   255 RYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFV 319
            :.|....|..|....|.|..|.|.|...|..|.|...::.....|.:.|.......|..|::.|:
  Rat   421 QVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFL 485

  Fly   320 ----RRSHLTSHYRS 330
                :..|.|.|:|:
  Rat   486 TCKEKMDHKTQHHRT 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 6/20 (30%)
C2H2 Zn finger 226..243 CDD:275368 6/17 (35%)
SUF4-like 254..>301 CDD:411020 13/46 (28%)
C2H2 Zn finger 254..275 CDD:411020 6/20 (30%)
C2H2 Zn finger 254..275 CDD:275368 6/20 (30%)
C2H2 Zn finger 283..303 CDD:275368 4/19 (21%)
C2H2 Zn finger 283..301 CDD:411020 4/17 (24%)
zf-H2C2_2 296..320 CDD:463886 5/27 (19%)
zf-met 309..333 CDD:463736 7/26 (27%)
C2H2 Zn finger 311..329 CDD:275368 6/21 (29%)
Zfp280dNP_001101635.2 DUF4195 45..229 CDD:463993
C2H2 Zn finger 323..357 CDD:275371 6/35 (17%)
C2H2 Zn finger 360..381 CDD:275368 6/20 (30%)
C2H2 Zn finger 390..411 CDD:275368 6/20 (30%)
C2H2 Zn finger 420..439 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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