DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and Zscan5b

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_573467.2 Gene:Zscan5b / 170734 MGIID:2159640 Length:468 Species:Mus musculus


Alignment Length:302 Identity:79/302 - (26%)
Similarity:125/302 - (41%) Gaps:63/302 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGNELPPFICSPCELDLQTAIAFRERVIRTQKTLQESPNLGNAELIESFAVGVEKEIQYAEEVTE 109
            ||::..|        ||:.|.|   .|...|..|   |.||.|.     ::||:..:|..|:.  
Mouse   211 PGSDSVP--------DLEEAEA---SVFVGQDPL---PALGPAG-----SLGVKGAVQPQEDT-- 254

  Fly   110 IEVIDLLPE-EHLLEETEEPYEICEQNEQPQVKVPAQEKKLRRSTKT-----TPTVFTSVKFADN 168
              |:|.:|. .|:||                     ::..|.|..::     .||......:..|
Mouse   255 --VVDAVPSFTHILE---------------------RDLALNRDLQSLSGFNLPTSQGVASYMGN 296

  Fly   169 SQ-----ATRTQWSRLTEDEVVALKRERRKRDCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQ 228
            ::     |.....:...|.:|.:|..:.|.:   |.:|.:.|...|.|.||...|||.:.|.|..
Mouse   297 TEDGLEAANPEPANPQPEKQVDSLAGQARFQ---CTECKKSFLYKSRFDLHQRSHTGERPFKCIL 358

  Fly   229 CSQQFYTATLLRRHQELHAGNALFQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMS 293
            |::.|..::.||.||.:|.|...:.|..|...:::.|....|.|: ||..|||.||:|.:.|...
Mouse   359 CNKAFVQSSDLRVHQRVHTGEKPYMCEVCGMEFAHGSTLQGHSRV-HTKEKPFVCKDCGQRFCHK 422

  Fly   294 GKLRTHMLSHTGVRAFHCDSCQVSFVR----RSHLTSHYRSK 331
            |.|..|...|..:|.:.|..|..:|.:    :.|:.:|.|.:
Mouse   423 GNLNVHFRIHCNLRPYVCKKCNKTFRQQGTWKRHMKTHLRKR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 10/34 (29%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
zf-C2H2 281..303 CDD:278523 8/21 (38%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 296..320 CDD:290200 7/23 (30%)
C2H2 Zn finger 311..329 CDD:275368 5/21 (24%)
Zscan5bNP_573467.2 SCAN 33..117 CDD:153421
C2H2 Zn finger 328..348 CDD:275368 7/19 (37%)
zf-H2C2_2 344..365 CDD:372612 8/20 (40%)
C2H2 Zn finger 356..376 CDD:275368 7/19 (37%)
zf-H2C2_2 368..393 CDD:372612 8/24 (33%)
C2H2 Zn finger 384..404 CDD:275368 5/20 (25%)
zf-H2C2_2 397..419 CDD:372612 10/22 (45%)
zf-C2H2 410..432 CDD:333835 8/21 (38%)
C2H2 Zn finger 412..432 CDD:275368 7/19 (37%)
zf-C2H2 438..460 CDD:333835 4/21 (19%)
C2H2 Zn finger 440..460 CDD:275370 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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