DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and ZNF560

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_689689.2 Gene:ZNF560 / 147741 HGNCID:26484 Length:790 Species:Homo sapiens


Alignment Length:383 Identity:95/383 - (24%)
Similarity:144/383 - (37%) Gaps:91/383 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGLFIFCSTPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAIAFRER 70
            |:.||......|..|     |.:..|          :|     :.|:.|..|.........|.|.
Human   350 CKECGKDFRYPTHLN-----NHMQTH----------IG-----IKPYKCKHCGKTFTVPSGFLEH 394

  Fly    71 VIRTQKTLQESPNLGNAELIESF--AVGVEKEIQ-YAEEVT---------EIEVIDLLPEEHL-L 122
            | ||.  ..|.| .|..|..::|  :.|:.:.|: :|.|.|         .|....|.  .|| :
Human   395 V-RTH--TGEKP-YGCKECGKAFGTSAGLIEHIRCHAREKTFKCDHCGKAFISYPSLF--GHLRV 453

  Fly   123 EETEEPYE---------------------------ICEQNEQPQVKVPAQEKKLRRSTKTTP--- 157
            ...|:|||                           .|:|..:..|...:....||..|...|   
Human   454 HNGEKPYEHKEYGKAFGTSSGVIEDRRSNTGQKRFDCDQCGKVFVSFSSLFAHLRTHTGEKPFKC 518

  Fly   158 ----TVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRKRDCICEQCGRHFTCPSNFKLHLLRH 218
                ..|||      |...|......||:.:..           |::||:.||..|....||..|
Human   519 YKCGKPFTS------SACLRIHMRTHTEERLYQ-----------CKKCGKAFTKCSYLTKHLRTH 566

  Fly   219 TGVKSFACDQCSQQFYTATLLRRHQELHAGNALFQCRYCEATYSNASGRIQHERMRHTNVKPFTC 283
            .|.|.:.|.:|.:.|...:.|.:|...|:|...::|:.|...::..|...:|.| |||..||:..
Human   567 AGEKPYECMKCGKAFTERSYLTKHLRRHSGEKPYECKKCGKAFTERSDLTKHLR-RHTGDKPYEY 630

  Fly   284 KECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKGHAHTSSAQA 341
            |:|.|:|.:|..|..|:.:|||.:.:.|::|:.::.|...||.|.::.....||...|
Human   631 KDCGKAFVVSSSLVDHLRTHTGYKPYKCNACEKAYSRSCVLTQHLKTHAAEKTSECNA 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 16/73 (22%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..243 CDD:275368 4/16 (25%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
zf-C2H2 281..303 CDD:278523 7/21 (33%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
zf-H2C2_2 296..320 CDD:290200 7/23 (30%)
C2H2 Zn finger 311..329 CDD:275368 6/17 (35%)
ZNF560NP_689689.2 KRAB 13..69 CDD:214630
KRAB 13..50 CDD:279668
KRAB 110..161 CDD:214630
KRAB 110..149 CDD:279668
C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 323..342 CDD:275368
COG5048 344..754 CDD:227381 95/383 (25%)
C2H2 Zn finger 350..370 CDD:275368 6/24 (25%)
zf-H2C2_2 362..386 CDD:290200 7/43 (16%)
C2H2 Zn finger 378..398 CDD:275368 6/20 (30%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..454 CDD:275368 4/21 (19%)
C2H2 Zn finger 490..510 CDD:275368 5/19 (26%)
zf-H2C2_2 502..527 CDD:290200 5/24 (21%)
C2H2 Zn finger 518..538 CDD:275368 5/25 (20%)
zf-H2C2_2 531..554 CDD:290200 6/33 (18%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
zf-H2C2_2 558..582 CDD:290200 7/23 (30%)
C2H2 Zn finger 574..594 CDD:275368 5/19 (26%)
zf-H2C2_2 586..610 CDD:290200 6/23 (26%)
zf-C2H2 600..622 CDD:278523 5/22 (23%)
C2H2 Zn finger 602..622 CDD:275368 5/20 (25%)
C2H2 Zn finger 630..650 CDD:275368 7/19 (37%)
C2H2 Zn finger 658..678 CDD:275368 6/19 (32%)
C2H2 Zn finger 714..734 CDD:275368
zf-H2C2_2 726..751 CDD:290200
C2H2 Zn finger 742..762 CDD:275368
zf-H2C2_2 757..779 CDD:290200
C2H2 Zn finger 770..790 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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