DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1792 and LOC1278771

DIOPT Version :10

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_318400.3 Gene:LOC1278771 / 1278771 VectorBaseID:AGAMI1_001625 Length:277 Species:Anopheles gambiae


Alignment Length:250 Identity:53/250 - (21%)
Similarity:79/250 - (31%) Gaps:58/250 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ICSPCELDLQTAIAFRERVIRTQKTLQESPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLP 117
            ||..|...:|....||.|..:....:|.:..:.|.:...|   |...|.....|.|.:    ::|
Mosquito    73 ICRRCLQAVQDFYHFRVRSNKVNDLIQVTTVVANGDDDNS---GSGNEAPAKRETTTV----VVP 130

  Fly   118 EEHLLEETEEPYEICEQNEQPQVKVPAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTED 182
                ...|..|....:|..:|.:        :..::|||                          
Mosquito   131 ----CPTTTTPLPAAKQQPKPSI--------VSSASKTT-------------------------- 157

  Fly   183 EVVALKRERRKRDCICEQCGRHFTCPSNFKLHLLR-HTGVKSFACDQCSQQFYTATLLRRHQELH 246
                  .||..|   |..|.:.|...:....|..| |...:...|..|..||..|..|.||....
Mosquito   158 ------GERSNR---CRYCPKSFRTVAELAEHGKRTHVAGRQHHCPNCLAQFQHAPSLARHMRSR 213

  Fly   247 AGNAL--FQCRYCEATYSNASGRIQHERMRHTNVKPFTCKECNKSFAMSGKLRTH 299
            :..|.  ::||.|..::........|.|: |....|:.|.:|...|.....||.|
Mosquito   214 SCFAFSKYRCRVCSESFPERDQWADHIRI-HAKDFPYQCPDCWSQFKHKATLRRH 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 7/26 (27%)
C2H2 Zn finger 198..218 CDD:275368 5/20 (25%)
C2H2 Zn finger 226..243 CDD:275368 7/16 (44%)
SUF4-like 254..>301 CDD:411020 12/45 (27%)
C2H2 Zn finger 254..275 CDD:411020 5/20 (25%)
C2H2 Zn finger 254..275 CDD:275368 5/20 (25%)
C2H2 Zn finger 283..303 CDD:275368 5/16 (31%)
C2H2 Zn finger 283..301 CDD:411020 5/16 (31%)
zf-H2C2_2 296..320 CDD:463886 2/3 (67%)
zf-met 309..333 CDD:463736
C2H2 Zn finger 311..329 CDD:275368
LOC1278771XP_318400.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.