DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and znf341

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001108045.1 Gene:znf341 / 100136854 ZFINID:ZDB-GENE-080204-99 Length:796 Species:Danio rerio


Alignment Length:331 Identity:78/331 - (23%)
Similarity:121/331 - (36%) Gaps:77/331 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FCSTP-SNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAIAFRERVIRTQKT 77
            |||.. |:.|:..:.:..|:             |.::...:...|....|....|.|.:...|:.
Zfish   420 FCSDKFSSYFQLKSHMTQHK-------------GEQVYRCVLKSCSQTFQKLDQFLEHIHTHQEQ 471

  Fly    78 LQESPNLGNAELIESFAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEETEEPYEICEQNEQPQVKV 142
            |....:..:......|.:|:.   ||..        ...|::...:||.  |..|.:.:......
Zfish   472 LTYRCHQCSKVFPSLFELGLH---QYTH--------SFCPQQSQRKETS--YYRCMKCQSKYSTQ 523

  Fly   143 PAQEKKLRRSTKTTPTVFTSVKFADNSQATRTQWSRLTEDEVVALKRERRKRDCICEQCGRHFTC 207
            .|.|:.|..:|...|                                        |..|.:.|.|
Zfish   524 EALEQHLLNATHNYP----------------------------------------CPHCQKVFPC 548

  Fly   208 PSNFKLHLLRHTGVKSFACDQCSQQFYTATLLRRHQELHAGNALFQCRYCEATYSNASGRIQHER 272
            ...|:.||..|.....|.|..|.:.|.|...|:.|.::|:|...|:|..||||: |...:::...
Zfish   549 ERYFRRHLSTHGVGGKFKCQICKKFFKTEHYLKLHTQIHSGEKPFKCSVCEATF-NRKDKVKRHM 612

  Fly   273 MRHTNVKPFTCK-----ECNKSFAMSGKLRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKG 332
            :.|...|.:.|.     .|.|.|....||:.|:|||:|::.|.|..||.||.||:|:..|.||  
Zfish   613 LIHEPFKKYKCPFRTHVGCTKEFNRPDKLKAHILSHSGIKPFKCQVCQKSFSRRAHMLEHQRS-- 675

  Fly   333 HAHTSS 338
              ||.:
Zfish   676 --HTDN 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 13/66 (20%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 6/20 (30%)
zf-C2H2 281..303 CDD:278523 8/26 (31%)
C2H2 Zn finger 283..303 CDD:275368 8/24 (33%)
zf-H2C2_2 296..320 CDD:290200 12/23 (52%)
C2H2 Zn finger 311..329 CDD:275368 9/17 (53%)
znf341NP_001108045.1 COG5048 295..676 CDD:227381 76/326 (23%)
C2H2 Zn finger 296..316 CDD:275368
zf-H2C2_2 308..333 CDD:290200
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 418..438 CDD:275368 5/17 (29%)
C2H2 Zn finger 446..468 CDD:275368 4/21 (19%)
C2H2 Zn finger 476..496 CDD:275368 4/22 (18%)
C2H2 Zn finger 513..535 CDD:275370 4/21 (19%)
C2H2 Zn finger 539..559 CDD:275368 7/19 (37%)
C2H2 Zn finger 567..587 CDD:275368 6/19 (32%)
zf-H2C2_2 579..604 CDD:290200 10/25 (40%)
C2H2 Zn finger 595..615 CDD:275368 6/20 (30%)
C2H2 Zn finger 623..648 CDD:275368 8/24 (33%)
zf-H2C2_2 641..665 CDD:290200 12/23 (52%)
C2H2 Zn finger 656..676 CDD:275368 11/23 (48%)
C2H2 Zn finger 684..701 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579934
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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