DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1792 and bcl6ab

DIOPT Version :9

Sequence 1:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_005171194.1 Gene:bcl6ab / 100001936 ZFINID:ZDB-GENE-030131-7523 Length:566 Species:Danio rerio


Alignment Length:300 Identity:69/300 - (23%)
Similarity:107/300 - (35%) Gaps:90/300 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 LLEETEEPYEICEQN--EQP-----QVKVPAQEKKLRRSTKTTPTVFTSVKF------------- 165
            ||....|..|.|...  |.|     |...||:.....|...:.|:..|..|.             
Zfish   261 LLSSEVENIEACHTGGPESPLRSDCQPNSPAESSGCSRRPASPPSSITYAKVHNWKKYKFIVLNS 325

  Fly   166 ADNSQAT---------------RTQWSRLTEDEVVALKRE----------------------RRK 193
            .|||..|               :.|.:|.|::   .:|:|                      .|:
Zfish   326 TDNSSLTPPHTVSESTNQNAEHKGQDNRSTDE---CIKKEEHGSSVHNTFTEESSMGSTNSAERE 387

  Fly   194 RDCICEQC------------GRHFTCP----------SNFKLHLLRHTGVKSFACDQCSQQFYTA 236
            | ..|.:|            |:.:.|.          :....|...|||.|.:.|:.|..||...
Zfish   388 R-VYCNECESEAEKPQWLQDGKPYKCDRCQAMFHYKGNPLSSHKSVHTGEKPYRCNVCGAQFNRP 451

  Fly   237 TLLRRHQELHAGNALFQCRYCEATYSNASGRIQHER---MRHTNVKPFTCKECNKSFAMSGKLRT 298
            ..|:.|..:|:|...::|..|.:.:.    ::.|.|   :.||..||:.|..|...|.....|::
Zfish   452 ANLKTHSRIHSGEKPYKCETCSSRFV----QVAHLRAHVLIHTGEKPYPCDICGTRFRHLQTLKS 512

  Fly   299 HMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKGHAHTSS 338
            |:..|||.:.:||::|.:.|..:|.|..|.|.|..|.|::
Zfish   513 HLRIHTGEKPYHCENCDLRFRHKSQLRLHLRQKHGAITNT 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1792NP_651878.1 zf-AD 6..80 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/41 (12%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
C2H2 Zn finger 254..275 CDD:275368 4/23 (17%)
zf-C2H2 281..303 CDD:278523 5/21 (24%)
C2H2 Zn finger 283..303 CDD:275368 5/19 (26%)
zf-H2C2_2 296..320 CDD:290200 9/23 (39%)
C2H2 Zn finger 311..329 CDD:275368 6/17 (35%)
bcl6abXP_005171194.1 BTB 22..126 CDD:279045
BTB 33..128 CDD:197585
C2H2 Zn finger 412..433 CDD:275368 2/20 (10%)
zf-H2C2_2 426..450 CDD:290200 9/23 (39%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
zf-H2C2_2 453..478 CDD:290200 6/28 (21%)
C2H2 Zn finger 469..489 CDD:275368 4/23 (17%)
zf-H2C2_2 481..506 CDD:290200 9/24 (38%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 510..534 CDD:290200 9/23 (39%)
C2H2 Zn finger 525..543 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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