DRSC/TRiP Functional Genomics Resources

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Protein Alignment Med and daf-14

DIOPT Version :9

Sequence 1:NP_524610.1 Gene:Med / 43725 FlyBaseID:FBgn0011655 Length:771 Species:Drosophila melanogaster
Sequence 2:NP_001255475.1 Gene:daf-14 / 177908 WormBaseID:WBGene00000910 Length:331 Species:Caenorhabditis elegans


Alignment Length:322 Identity:76/322 - (23%)
Similarity:127/322 - (39%) Gaps:87/322 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 AAGTWTGPNTLTYTQSMQPP------------------------DPRSLPGGFWNSSLSGDL--G 518
            |||.:..|:.:....|:..|                        |..:.|..|.|.|....|  .
 Worm    40 AAGNYMYPDQVHLPASINNPNMPINDWLEDAPMPDCYNVPSTSTDENNDPFPFSNISSQSSLKPK 104

  Fly   519 SPQQT-----PPQQQQQQQQPRLLSRQPPPEYWCSIAYFELDTQVGETFKVPSAK-PNVIIDGYV 577
            :|::.     |...:....:|:....:.|   ||:|.|:||..::|:.|:   || |.:.|||  
 Worm   105 TPEKAVVEVRPTGNEMLDPEPKYPKEEKP---WCTIFYYELTVRLGKAFE---AKVPTITIDG-- 161

  Fly   578 DPSGGNRFCLGALSN--VHRTEQSERARLHIGKGVQLDLRGEGDVWLRCLSDNSVFVQSYYLDRE 640
             .:|.:..|..:|::  ..|..:|.:.|..:|.|:||... .|::||..|:|..||||..:|::.
 Worm   162 -ATGASDECRMSLTSQPSSRNSKSSQIRNTVGAGIQLAYE-NGELWLTVLTDQIVFVQCPFLNQT 224

  Fly   641 AGR---------TPGDAVHKIYPAACIKVFDLRQCHQQMHSLATNAQAAAAAQAAAVAGVANQQM 696
            ..:         ..||...       :|:||..|..|:              :..|:..:..:: 
 Worm   225 LNKPLKYVFRLQNKGDQKR-------MKIFDKEQFEQE--------------KTLALGPLTEKE- 267

  Fly   697 GGGGRSMTAAAGIGVDDLRRLCILRLSFVKGWGPDYPRQSIKETPCWIEVHLHRALQLLDEV 758
                        :..:.:|....:|:||.||:|..|.|..:...|||||:.||......|.|
 Worm   268 ------------VADERMRIFSNIRVSFCKGFGETYSRLKVVNLPCWIEIILHEPADEYDTV 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MedNP_524610.1 MH1_SMAD_4 42..166 CDD:199816
MH2_SMAD_4 543..760 CDD:199823 60/228 (26%)
daf-14NP_001255475.1 DWB 133..308 CDD:197770 57/218 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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