DRSC/TRiP Functional Genomics Resources

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Protein Alignment Med and tmem54

DIOPT Version :10

Sequence 1:NP_524610.1 Gene:Med / 43725 FlyBaseID:FBgn0288966 Length:771 Species:Drosophila melanogaster
Sequence 2:XP_002940070.3 Gene:tmem54 / 100485545 XenbaseID:XB-GENE-490434 Length:221 Species:Xenopus tropicalis


Alignment Length:27 Identity:7/27 - (25%)
Similarity:13/27 - (48%) Gaps:4/27 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   647 DAVHKIYPAACI----KVFDLRQCHQQ 669
            |....::...|.    |:.|:|.||::
 Frog   166 DGAEVVFSVRCFLAVSKLMDIRFCHKR 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MedNP_524610.1 MH1_SMAD_4 42..166 CDD:199816
MH2_SMAD_4 543..760 CDD:199823 7/27 (26%)
tmem54XP_002940070.3 BCLP 17..192 CDD:463527 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.

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