DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and CLN2

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_015067.1 Gene:CLN2 / 855819 SGDID:S000006177 Length:545 Species:Saccharomyces cerevisiae


Alignment Length:456 Identity:83/456 - (18%)
Similarity:154/456 - (33%) Gaps:132/456 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LQQQYEQYQHYQYQREQD-IAYYCQLQAARQQEQLMQQRTSMSSSVMPGLALPQDHQDHPAALL- 96
            |...:|..|.|..:...: ||..|:.   :...:|:.|:..|:         |.:.:.:....| 
Yeast    30 LLSHFEMLQEYHQEISTNVIAQSCKF---KPNPKLIDQQPEMN---------PVETRSNIITFLF 82

  Fly    97 ---------NGPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGG-----------SA 141
                     ||...:::.| .|.:....|::.|:.....|.....||.:.||           :.
Yeast    83 ELSVVTRVTNGIFFHSVRL-YDRYCSKRIVLRDQAKLVVATCLWLAAKTWGGCNHIINNVVIPTG 146

  Fly   142 GAGSG----------SGLGGAIGGGK-------------LANGINRNAEMP--TDWMRIADEGRY 181
            |...|          |.|....|.|:             :.:.:|.|...|  .|::...||.  
Yeast   147 GRFYGPNPRARIPRLSELVHYCGDGQVFDESMFLQMERHILDTLNWNIYEPMINDYVLNVDEN-- 209

  Fly   182 GTPGAAGLEYQKYEQQ---------QQLEDLAESEAGAVGGASNNNGESSSSLKKLEDQLHALTS 237
                 ..::|:.||.|         ::...|::.....|......|.|......||:.:|..|..
Yeast   210 -----CLMQYELYENQVTYDKQCSEKRQSQLSQDSDATVDERPYQNEEEEEEDLKLKIKLINLKK 269

  Fly   238 DELYETLKEYDVLQDKFHTV-------------------LLLP--KESRR-EVTAGGRDGSAYVL 280
            ..:..:..:||:|:.:...|                   |:.|  .||:. |:.:...:|...:.
Yeast   270 FLIDVSAWQYDLLRYELFEVSHGIFSIINQFTNQDHGPFLMTPMTSESKNGEILSTLMNGIVSIP 334

  Fly   281 RCLKMWYELPSDVLFSAMSLVDRFLDRMAVKPKHMACMSVASFHLAI-KQLDLKPIPAEDL---- 340
            ..|...|:..:.||        .|:::            |..:||.: ::|.:    |.:|    
Yeast   335 NSLMEVYKTVNGVL--------PFINQ------------VKEYHLDLQRKLQI----ASNLNISR 375

  Fly   341 -VTISQCGCTAGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNL--AKEIGGDFFKFYQ 402
             :|||...|:..:....:  |.:.......|.|:.::|.|.......||:  :..|....::|.|
Yeast   376 KLTISTPSCSFENSNSTS--IPSPASSSQSHTPMRNMSSLSDNSVFSRNMEQSSPITPSMYQFGQ 438

  Fly   403 Q 403
            |
Yeast   439 Q 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 15/83 (18%)
CLN2NP_015067.1 COG5024 33..524 CDD:227357 82/453 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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