DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and CYCA2;4

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_178153.1 Gene:CYCA2;4 / 844377 AraportID:AT1G80370 Length:461 Species:Arabidopsis thaliana


Alignment Length:357 Identity:72/357 - (20%)
Similarity:134/357 - (37%) Gaps:70/357 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QPSTSAQAAAAAAAS---------AGGSAGAGSGSGLGGAIGGGKLANGINRNAEMPTDWMRIAD 177
            |.|:|::.|:::|.|         ...||||........::|..:            |.:..||.
plant   104 QSSSSSKVASSSATSQVTDAKVEVVSNSAGASLSVFTDTSLGTNE------------TSYSIIAK 156

  Fly   178 EGRYGTPGAAGLEYQKYEQQQQLEDLAESEAGAVGGASNNNGESSSSLKKLEDQLHALTSDELYE 242
            ......|...|                 :...:.||||:.......|..| :..|.:|.:.::|.
plant   157 PSSRSPPRPFG-----------------TVERSCGGASSPKFVDIDSDDK-DPLLCSLYAPDIYY 203

  Fly   243 TLKEYDVLQDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLKMW-------YELPSDVLFSAMSL 300
            .|:..::.:..|...:   ::::|:||...|.       .|..|       |.|..|.|:..:.|
plant   204 NLRVAELKRRPFPDFM---EKTQRDVTETMRG-------ILVDWLVEVSEEYTLVPDTLYLTVYL 258

  Fly   301 VDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKLG 365
            :|.||....|:.:.:..:.:....:|.|..::.....|:...|:....|...:..|...:.....
plant   259 IDWFLHGNYVERQRLQLLGITCMLIASKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFS 323

  Fly   366 VQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEELENRL-EILMCDVKTTVITPS 429
            .|: :.| ||.::||.:..     |.::     .|..|.:::|.|.|.| |:.:.|.......||
plant   324 FQI-YTP-TSKTFLRRFLR-----AAQV-----SFPNQSLEMEFLANYLTELTLMDYPFLKFLPS 376

  Fly   430 TLALVLICLHLDFHIKESYTRGSPELKHVFEY 461
            .:|...:.| ..:.:.:|....:|.|:|...|
plant   377 IIAASAVFL-AKWTLNQSSHPWNPTLEHYTTY 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 15/77 (19%)
CYCA2;4NP_178153.1 CYCLIN_AtCycA_like_rpt1 190..325 CDD:410265 26/144 (18%)
CYCLIN_AtCycA-like_rpt2 329..443 CDD:410210 23/91 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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