DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and AT1G20590

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001319051.1 Gene:AT1G20590 / 838648 AraportID:AT1G20590 Length:265 Species:Arabidopsis thaliana


Alignment Length:141 Identity:31/141 - (21%)
Similarity:58/141 - (41%) Gaps:32/141 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIANKL 364
            ::||||....:..|.:..:.|.:..||.|..::.....:||:.||....:..::..|..::||.|
plant    65 VIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTL 129

  Fly   365 GVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEELENRLEIL------MCDVKT 423
              |...:..|.                      :.|.::.:|..:.:.:||||      :|.|:.
plant   130 --QFNFSLPTP----------------------YVFMKRFLKAAQSDKKLEILSFFMIELCLVEY 170

  Fly   424 TVI--TPSTLA 432
            .::  .||.||
plant   171 EMLEYLPSKLA 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 16/64 (25%)
AT1G20590NP_001319051.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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