DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and CYCA2;3

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_173010.1 Gene:CYCA2;3 / 838127 AraportID:AT1G15570 Length:450 Species:Arabidopsis thaliana


Alignment Length:494 Identity:90/494 - (18%)
Similarity:169/494 - (34%) Gaps:135/494 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVPVRYSSAAAEYAAEVDCELESTLQQQQQLHLQQQYEQYQHYQYQREQDIAYYCQLQAA---- 61
            :|.|...|.|:|..|:||    .||.|.||:::.::...:                ..:|.    
plant     7 VSRPFTRSLASALRASEV----TSTTQNQQRVNTKRPALE----------------DTRATGPNK 51

  Fly    62 RQQEQLMQQRTSMSSSVMPGLALPQDHQDHPAALLNGPHNNNI------GLAMDAHSINAIL--V 118
            |::..::.:.|:::|:               .|:|...::..|      |||..:....::.  |
plant    52 RKKRAVLGEITNVNSN---------------TAILEAKNSKQIKKGRGHGLASTSQLATSVTSEV 101

  Fly   119 DDEQPSTSAQAAAAAAASAGGSAGAGSGSGLGGAIGGGKLANGINRNAEMPTDWMRIADEGRYGT 183
            .|.|..|.|:...|:..:...|...|:.:.....|.        ..|:.:|              
plant   102 TDLQSRTDAKVEVASNTAGNLSVSKGTDNTADNCIE--------IWNSRLP-------------- 144

  Fly   184 PGAAGLEYQKYEQQQQLEDLAESEAGAVGGASNNNGESSSSLKKLED--------QLHALTSDEL 240
            |...|            ...:.:|..||.|:|     :...:.|..|        .|..|.:.|:
plant   145 PRPLG------------RSASTAEKSAVIGSS-----TVPDIPKFVDIDSDDKDPLLCCLYAPEI 192

  Fly   241 YETLKEYDV----LQDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLKMW-------YELPSDVL 294
            :..|:..::    |.|....:       :::||...|.       .|..|       |.|.||.|
plant   193 HYNLRVSELKRRPLPDFMERI-------QKDVTQSMRG-------ILVDWLVEVSEEYTLASDTL 243

  Fly   295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGV 359
            :..:.|:|.||....|:.:.:..:.:....:|.|..::.....|:...|:....|...:..|...
plant   244 YLTVYLIDWFLHGNYVQRQQLQLLGITCMLIASKYEEISAPRIEEFCFITDNTYTRDQVLEMENQ 308

  Fly   360 IANKLGVQMGHAPITSVSYLRIYY--ALFRNLAKEIGGDFFKFYQQLIKLEELENRLEILMCDVK 422
            :......|: :.| |..::||.:.  |....|:..:..:|...|           ..|:.:.|..
plant   309 VLKHFSFQI-YTP-TPKTFLRRFLRAAQASRLSPSLEVEFLASY-----------LTELTLIDYH 360

  Fly   423 TTVITPSTLALVLICLHLDFHIKESYTRGSPELKHVFEY 461
            .....||.:|...:.| ..:.:.:|....:|.|:|...|
plant   361 FLKFLPSVVAASAVFL-AKWTMDQSNHPWNPTLEHYTTY 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 16/77 (21%)
CYCA2;3NP_173010.1 CYCLIN_AtCycA_like_rpt1 181..316 CDD:410265 27/148 (18%)
CYCLIN_AtCycA-like_rpt2 320..434 CDD:410210 19/92 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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