DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and ccnb3

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001070187.1 Gene:ccnb3 / 767751 ZFINID:ZDB-GENE-060929-684 Length:398 Species:Danio rerio


Alignment Length:367 Identity:61/367 - (16%)
Similarity:120/367 - (32%) Gaps:138/367 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 ESSSSLKKLEDQLHALTS-DELYETLK--------------------------EYDV----LQDK 253
            :.:|.|.|.:..|.::.| :|..|.||                          |:|:    |.|.
Zfish    72 QKTSVLSKNDVNLKSIVSPEEKLEELKNVESDIEETSCKDPIPPHLLPPEIPPEFDIDSEHLSDS 136

  Fly   254 FHTVLLLPKESRREVTAGGRDGSAYVLRC----------------LKMW-------YELPSDVLF 295
            .||     .|..:|:....::.....:.|                |..|       :||..:.|:
Zfish   137 SHT-----SEYAKEIFDYLKNREEKFVLCDYMVDQPNLNTNMRAILVDWLVEVQENFELNHETLY 196

  Fly   296 SAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVI 360
            .|:.:.|.:|.....|.:.:..:...:..:|.|..:..|...:|.:.|      ..|..:.:.:|
Zfish   197 LAVKVTDHYLAVSQTKREALQLIGSTAMLIASKFEERAPPCVDDFLYI------CDDAYKRSQLI 255

  Fly   361 ANKLGVQMGHAPITSVSY---LRIYYALFRNLAK--EIGGDFFKFYQQLIKLEELENRLEILMCD 420
            :.::.:      :.::::   :.:.|...|..||  ..|.|.....:.:.:|    :.||:....
Zfish   256 SMEISI------LQALNFDTNIPVPYRFLRRYAKCVNAGMDTLTLARFICEL----SLLEMEFVP 310

  Fly   421 VKTTVITPSTLALVLI---------CLHLDFHIKESYTRGSPELKHVFEYILFLQQYMRIPDRVF 476
            |:.:::..:.|.:.|:         |  |.||                                 
Zfish   311 VRASLLASACLLIALVTKDLGGWTQC--LQFH--------------------------------- 340

  Fly   477 TCGFSIVSGILSHYNGQNKAPYKQRLVWKLSS---RTLRVLR 515
                       |.|:.::.||..::|...|||   ..|.|:|
Zfish   341 -----------SGYSAEDLAPVVRKLHHMLSSPADSKLAVIR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 14/77 (18%)
ccnb3NP_001070187.1 Cyclin_N 145..270 CDD:278560 18/136 (13%)
Cyclin_C 272..386 CDD:281044 27/150 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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