DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and ccndx

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001165869.1 Gene:ccndx / 567411 ZFINID:ZDB-GENE-080917-47 Length:297 Species:Danio rerio


Alignment Length:277 Identity:52/277 - (18%)
Similarity:96/277 - (34%) Gaps:66/277 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 ESSSSLKKLEDQLHALTSDELYETLKEYDVLQDKFHTVLLLPKESRREVTAGGRDGSAYVLRCLK 284
            :.|:|.:::..:|  |.|:|.|        |....:..|:..:..|||.              |.
Zfish    26 DPSASGQRVIQRL--LQSEERY--------LPSSLYISLVQREPQRREE--------------LA 66

  Fly   285 MW-------YELPSDVLFSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVT 342
            .|       .:....|...|:||:||:|......|...:|::.|...||.|..:...:.|:.|..
Zfish    67 KWTMEVCCECDCDESVFPLAVSLLDRYLSATLSLPVSPSCLAAACILLASKVTESDTVSADTLCA 131

  Fly   343 ISQCGCTAGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIG--GDFFKFYQQ-- 403
            .::....:.:|..|..|:...|  :.....:|...::.::......|....|  |||....::  
Zfish   132 AAEYDFLSANLREMERVVLATL--RWDVLAVTPQDFIPLFLRTLGELRDGDGHTGDFLTTMRRHG 194

  Fly   404 -------------------LIKLEELENRL---------EILMCDVKTTVITPSTLALVLICLHL 440
                               |:....|.:.|         |:.:.......:..:.:||:..|..|
Zfish   195 DTLVAMCVCDSRFLGTPPSLVAAAALNSALRGLRARSAGEMSLMTAALATLCQTDVALLQCCTEL 259

  Fly   441 -DFHIKESYTRGSPELK 456
             |..::|....|:.|.|
Zfish   260 IDGALRERLRTGAQEQK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 18/77 (23%)
ccndxNP_001165869.1 Cyclin_N 34..157 CDD:278560 31/148 (21%)
Cyclin_C 160..>260 CDD:281044 13/99 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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