DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycG and CCNJ

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_016871843.1 Gene:CCNJ / 54619 HGNCID:23434 Length:431 Species:Homo sapiens


Alignment Length:93 Identity:23/93 - (24%)
Similarity:34/93 - (36%) Gaps:22/93 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QQLHLQQQYEQYQHYQYQREQDIAYYCQLQAARQQEQ-----LMQQRTSMSSSVMPGLALPQDHQ 89
            |||||                 :|..|.|.|::.:|:     .::|..|:.......|.|.:.:.
Human   128 QQLHL-----------------VALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNL 175

  Fly    90 DHPAALLNGPHNNNIGLAMDAHSINAIL 117
            .|...||......|:.|...||.|...|
Human   176 LHMELLLLETFQWNLCLPTAAHFIEYYL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043
CCNJXP_016871843.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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