DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and Ccno

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_006232009.1 Gene:Ccno / 499528 RGDID:1565217 Length:352 Species:Rattus norvegicus


Alignment Length:267 Identity:62/267 - (23%)
Similarity:102/267 - (38%) Gaps:63/267 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 DLAESEAGAVGGASNNNGESSSSLKKLEDQLHALTSDELYETLKEY--------DVLQDKFHTVL 258
            ||.||.:.:..||.:....:......|......||:.:| :|.:||        ...::.||   
  Rat    59 DLFESPSSSSDGADSPAVSAVRDCSSLLSSAQPLTALDL-QTFREYGQSCYDFRKAQENLFH--- 119

  Fly   259 LLPKES---RREVTAGGRDGSAYVLRC-LKMW-------YELPSDVLFSAMSLVDRFLDRMAVKP 312
              |:||   :.:|||..        || |..|       :.|..:.|...::.:||||....|..
  Rat   120 --PRESLARQPQVTAES--------RCKLLSWLLQVHRQFGLSFESLCLTVNTLDRFLLTTPVAA 174

  Fly   313 KHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLER-----MAGVIANKLGVQMGHAP 372
            .....:.|....:|.||:::.|...:.|:.:  ||   |...|     :..::.:||...:| ||
  Rat   175 DCFQLLGVTCLLIACKQVEVHPPRMKQLLAL--CG---GAFSRQQLCNLECIVLHKLHFSLG-AP 233

  Fly   373 ITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEELENR------LEILMCDVKTTVITPSTL 431
            .     :..:...|.:...|.|        |:...|.|..:      .|:.:.|...|..|||.|
  Rat   234 T-----INFFLEHFTHSRVEAG--------QVEVTEALAAQTLARGVAELSLTDYAFTTYTPSLL 285

  Fly   432 ALVLICL 438
            |:..:.|
  Rat   286 AICCLAL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 18/82 (22%)
CcnoXP_006232009.1 Cyclin_N 108..231 CDD:278560 31/140 (22%)
Cyclin_C 233..>298 CDD:281044 16/73 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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