DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycG and CycA

DIOPT Version :9

Sequence 1:NP_001263146.1 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_524030.2 Gene:CycA / 39340 FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster


Alignment Length:445 Identity:89/445 - (20%)
Similarity:159/445 - (35%) Gaps:91/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QQRTSMSSSVMPGLALPQ--DHQDHPAALLNG--------PH--------NNN-------IGLAM 108
            |....||:...||:.:|.  .:...|.|::.|        |.        |||       :.:..
  Fly     5 QIHQDMSNKENPGIKIPAGVKNTKQPLAVIGGKAEKNALAPRANFAVLNGNNNVPRPAGKVQVFR 69

  Fly   109 DAHSINAILVDDEQPSTSAQAAAAAAA-----------SAGGSAGAGSGSGLGGAIGGGKLANGI 162
            |..::|.    ||.....|:.:.....           ....:..|.||..|      ..|.:..
  Fly    70 DVRNLNV----DENVEYGAKKSNVVPVVEQFKTFSVYEDNNDTQVAPSGKSL------ASLVDKE 124

  Fly   163 NRNAEMPTDWMRIADEGRYGTPGAAGLEYQKYEQQQQLEDLAESEAGAVGGASNNNGES-SSSLK 226
            |.:.:.......:.|.....||.:...........:.:..:.:|...:||   ...|.| :..:|
  Fly   125 NHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGVIQSSDISVG---TETGVSPTGRVK 186

  Fly   227 KL---EDQLHALTSDELYETLKEYDVLQDKFHTVLLLPKE--SRREVTAGGRDGSAYVLRCLKMW 286
            :|   .|:...|...:....:.||....:|.|.    ||.  .||:     :|.|..:...|..|
  Fly   187 ELPPRNDRQRFLEVVQYQMDILEYFRESEKKHR----PKPLYMRRQ-----KDISHNMRSILIDW 242

  Fly   287 -------YELPSDVLFSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTIS 344
                   |:|.::.|:.::..:||||.:|||....:..:..|:.::|.|..::.|....:.|.::
  Fly   243 LVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLT 307

  Fly   345 QCGCTAGDLERMAGVIANKLGVQMGHAPITSVSYLRI-YYALFRNLAKEIGGDFFKFYQQLIKLE 408
            ....|...:.||..||...|...:    .|..:|:.| .||:..::.:::  .:...|...:.|.
  Fly   308 DDSYTKAQVLRMEQVILKILSFDL----CTPTAYVFINTYAVLCDMPEKL--KYMTLYISELSLM 366

  Fly   409 ELENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGSPELKHVFEYIL 463
            |.|..|:.|          ||.::...:.|.......|.:|   |.|:.:..|.|
  Fly   367 EGETYLQYL----------PSLMSSASVALARHILGMEMWT---PRLEEITTYKL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_001263146.1 CYCLIN <287..365 CDD:294043 20/77 (26%)
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 33/138 (24%)
Cyclin_C 334..450 CDD:281044 19/90 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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