DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycG and Ccne2

DIOPT Version :10

Sequence 1:NP_524609.2 Gene:CycG / 43724 FlyBaseID:FBgn0039858 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001102126.1 Gene:Ccne2 / 362485 RGDID:1307783 Length:405 Species:Rattus norvegicus


Alignment Length:207 Identity:41/207 - (19%)
Similarity:87/207 - (42%) Gaps:20/207 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 SDELYETL--KEYDVLQDKFHTVLLLPKESR-REVTAGGRDGSAYVLRCLKMWYELPSDVLFSAM 298
            |.|:::.:  ||...:.||...||....|.: |.:...      ::|...:: |.|..:..:.|.
  Rat   111 SQEVWQNMLQKESRYVHDKHFEVLHSDLEPQMRSILLD------WLLEVCEV-YTLHRETFYLAQ 168

  Fly   299 SLVDRF-LDRMAVKPKHMACMSVASFHLAIKQLDLKPIPAEDLVTISQCGCTAGDLERMAGVIAN 362
            ...||| |.:..|....:..:.:.|..:|.|..::.....::...::...|:..|:.:|...|..
  Rat   169 DFFDRFMLTQKDVNKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEVDILKMELNILK 233

  Fly   363 KLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQ--LIKLEELENRLEILMCDVKTTV 425
            .|..::  .|:|.:|:|.::..:  :..|:|.......|.|  .|::.:|   |::.:..:.:..
  Rat   234 ALKWEL--CPVTVISWLNLFLQV--DAVKDIPKVLLPQYSQETFIQIAQL---LDLCILAIDSLE 291

  Fly   426 ITPSTLALVLIC 437
            .....||...:|
  Rat   292 FQYRILAAAALC 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycGNP_524609.2 CYCLIN_CCNG 273..364 CDD:410227 16/91 (18%)
Ccne2NP_001102126.1 CYCLIN_SF 101..237 CDD:477360 27/132 (20%)
CYCLIN_SF 241..329 CDD:477360 14/68 (21%)

Return to query results.
Submit another query.